Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01665 ATGGGCAACATCTCAAGCGGCGGCAATCCCCGTCGCCGACACAGCGGAGCTTCACGGCGGAGCCACCCGCCGCCGCCGCCGCGGCCCGTTACGCCGCAGCCTGAGATCGCGGCGAATCCATTCGTGTACCATGGTGCTGCTGCACCGTACCCGAACCCTCCTCTGCATTACCCTCAGTACCATTACCCCGGTTACTACCCTCCGGTGCCACCCATGCCTTATCATCCTCATCAACATCAACATCATCATCGACACATGGACCCGGCGTGGATTCAGGGGCATTTCCCTAGTGGGCCCATGATGCCTAACCCTGCACCTTTCGTAGAGCATCAGAAAGCCGTTACAATAAAGAACGATGTCAACATCAGGAAAGAGACCCTTAAGCTTGAACCCGACGTAGAAAATTCTGGCCACTTCCTTGTTTCGTTTTCCTTCGATGCCACCGTTTCTGGCAGCATCACCATATATTTCTTTGCAAAAGAAGGTGAAGGCTGCATCCTCACACCAATGAAGGAAAACCAACTTGCACCAGTGTCTGTGCATTTCGAGCAAGGCCTTGGCCAGAAGTTTAGACAGGCAGCTGGAACTGGTATTGATTTTTCAGTGTTTGAAGAGTCTGAGTTATTGAAAGTGGGTGAAAAGGATGTCTACCCTCTAGCAGTAAAGGCAGACGCATCCCCTGGTAATCATGATGAGTCAGATAGATCTCCAACATCTAGTAACACAAACTCTCAGATTACGCAAACGGTGTTTGAGAAGGAGAAAGGAGAGTTCCGGGTGAAAGTTGTCAAGCAGATCTTGTGGGTGAATGGAATGAGGTATGAGCTGCAGGAGATATATGGTATTAGAAATTCAACGGAGAATGACCAAGGAAAATGTGTTATTTGCTTGTCAGAGCCCCGAGATACAATTGTCCTTCCCTGCCGGCATATGTGTATGTGTAGCGGATGTGCAAAGGATTCTAGGTTCCAGACAGATAGATGCTCAATTTGCAGACAACCAGTTGAGAGGCTGTTGGAGATATAG 1026 0.4971 MGNISSGGNPRRRHSGASRRSHPPPPPRPVTPQPEIAANPFVYHGAAAPYPNPPLHYPQYHYPGYYPPVPPMPYHPHQHQHHHRHMDPAWIQGHFPSGPMMPNPAPFVEHQKAVTIKNDVNIRKETLKLEPDVENSGHFLVSFSFDATVSGSITIYFFAKEGEGCILTPMKENQLAPVSVHFEQGLGQKFRQAAGTGIDFSVFEESELLKVGEKDVYPLAVKADASPGNHDESDRSPTSSNTNSQITQTVFEKEKGEFRVKVVKQILWVNGMRYELQEIYGIRNSTENDQGKCVICLSEPRDTIVLPCRHMCMCSGCAKDSRFQTDRCSICRQPVERLLEI 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01665 341 MobiDBLite consensus disorder prediction 1 35 - -
Gma03g01665 341 SMART ring_2 293 331 IPR001841 -
Gma03g01665 341 MobiDBLite consensus disorder prediction 223 245 - -
Gma03g01665 341 ProSiteProfiles Zinc finger RING-type profile. 293 332 IPR001841 -
Gma03g01665 341 PANTHER MAHOGUNIN 1 341 IPR045194 GO:0061630
Gma03g01665 341 Pfam Zinc finger, C3HC4 type (RING finger) 290 337 - -
Gma03g01665 341 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 293 332 IPR045195 -
Gma03g01665 341 MobiDBLite consensus disorder prediction 20 34 - -
Gma03g01665 341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 341 IPR013083 -
Gma03g01665 341 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 1 341 - -
Gma03g01665 341 SUPERFAMILY RING/U-box 292 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01665 Gma-Chr3 42721832 42724505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01665 97 312 C3H Transcription Factor Family AT3G09770 61.572 1.10e-94 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01665 - - gmx:100784713 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01665 03 42721832 42724505 Gma03g01665 03 42721832 42724505 ECH
Gma19g01711 19 46391221 46394605 Gma03g01665 03 42721832 42724505 GST