Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01657 ATGGACAAAGATGCTAATATAGAAATCCAACTCCCTCCCGGATTTAGATTCCACCCTTCTGATGAGGAGCTAATTGTTCACTATCTTAGAAACAAAGTCGCATCATCACCCCTTCCTGCTTCATTCATAACAGAAATAGATCTTTACAAGTATAATCCATGGGAGCTCCCAAGCAAAGCTTTGTTTGGGGAGGATGAGTGGTATTTCTTTACTCCTAGGGACAGGAAGTATCCCAATGGAGTGAGGCCTAATAGACCAGATGCTTCTGGTTATTGGAAGGCTACTGTGAATGACAAACCCATTTTCACTTCCTGTGGGATGAAGAGCATTGCAGTGAAGAAGGCCCTTGTGTTCTACAAGGGTCGTCCGCCAAAAGGATCTAAAACAGACTGGATCATGCATGAGTATAGGTTGCATGATTCTATGATCTCGAATTCAAGGCAGAGAGGGTCCATGAGACTGGATGAGTGGGTGTTGTGCCGAGTTCGACAAAAGACTATCAGCCCAAAAAGCATTTTGGAAGACTCAAATGAACCTATTTATGAACCAACAAGCCACTTTCAACAAATGAGTGTGAACTCAAATCCTGAAGCAGTTAAAAACTCTGCACAGTGA 615 0.4293 MDKDANIEIQLPPGFRFHPSDEELIVHYLRNKVASSPLPASFITEIDLYKYNPWELPSKALFGEDEWYFFTPRDRKYPNGVRPNRPDASGYWKATVNDKPIFTSCGMKSIAVKKALVFYKGRPPKGSKTDWIMHEYRLHDSMISNSRQRGSMRLDEWVLCRVRQKTISPKSILEDSNEPIYEPTSHFQQMSVNSNPEAVKNSAQ 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01657 204 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Gma03g01657 204 PANTHER NAC TRANSCRIPTION FACTOR 56 2 191 - -
Gma03g01657 204 MobiDBLite consensus disorder prediction 181 204 - -
Gma03g01657 204 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Gma03g01657 204 MobiDBLite consensus disorder prediction 171 204 - -
Gma03g01657 204 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
Gma03g01657 204 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Gma03g01657 204 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01657 Gma-Chr3 42656715 42657798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01657 11 174 NAC Transcription Factor Family AT1G69490 66.463 5.95e-81 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma03g01657 NAM 1.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01657 - - gmx:100788799 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01657 03 42656715 42657798 Gma03g01657 03 42656715 42657798 ECH
Gma19g01704 19 46309239 46310919 Gma03g01657 03 42656715 42657798 GST