Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01650 ATGGCCGATGACTTCGACTTCGCGGATAAAGTTCCTCCTTCATTCGATCGCGTGGGAAATGTGATCAAGGATTCTGGATCCAAAGGGTTCAATCCAGGATTAATTGTCCTCCTGGTTGTTGGTGGGTTGTTGTTGACATTCCTCATTGGAAATTATGTGCTCTACAGTTATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCTGTTTCAAAGAAGAAGATGAAAAAGGAGAGACTGAAGCAAGGTGTCTCTGCACCTGGAGAGTAG 270 0.4519 MADDFDFADKVPPSFDRVGNVIKDSGSKGFNPGLIVLLVVGGLLLTFLIGNYVLYSYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01650 89 PANTHER DNA-BINDING PROTEIN S1FA2 3 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gma03g01650 89 MobiDBLite consensus disorder prediction 64 89 - -
Gma03g01650 89 Pfam DNA binding protein S1FA 26 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gma03g01650 89 MobiDBLite consensus disorder prediction 65 79 - -
Gma03g01650 89 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01650 Gma-Chr3 42607802 42609107 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Gma03g01650 S1FA 9.8e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01650 - - gmx:100499820 161.77