Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01638 ATGGAGAGTATCTTACTCTTCTTCTCATCATTCAAGTTCGCACTCTCGCTCTCACTCATACTCCACTCACCTTTTTCCTCTGCTCAGATCATGCAAGCAGGTTTTGTAAGTTTGGACTGTGGAGGTACAGAAAAATTTGCTGATGAAATTGGTCTTCATTGGACTCCTGATGATAAACTTACTTATGGACAAATAAGCACTATATCAGTTGTAAATGAGACAAGGAAGCAATATACAACACTTCGACACTTTCCCGCTGATTCCAGGAAATACTGTTATACTCTTGAAGTTGTTAGCAGGACGAGATACCTATTGAGGGCCAGCTTCTTATACGGGAACTTTGACGATAACAATGTCTATCCAAAATTTGACATTTCTATTGGGCCTACGCATTGGTCTACTATTGTTATATCTGATGCTAATAGCATAGAAATGCGAGAGCTTATATTTTTGGCTTCAAGTCCTACAGTAAGTGTATGCTTATCGAATGCAACAACAGGACAACCATTCATATCTACGCTAGAACTTCGGCAATTCAACGGTTCAGTTTACTATACACAATTTGAGGAACACTTTTATCTTAGTGTCTCTGCAAGGATAAATTTTGGTGCAGAGAGTGATGCTCCAATTAGGTATCCTGATGACCCTTTTGATAGAATTTGGGAGTCAGATTCTGTGAAGAAAGCTAATTATCTTGTTGATGTTGCTGCTGGAACTGAGAAAATTTCTACAACAGTACCAATCGATGTCAACAGAGATGAAATGCCTCCGGTAAAAGTGATGCAAACAGCTGTAGTGGGTACTAATGGATCTCTAACTTACCGGTTGAACTTGGATGGTTTTCCGGGTACTGGTTGGGCATTCACCTATTTTGCAGAGATTGAAGATTTGGATCCCAATGAATCTAGAAAATTCAGGCTAGTACTTCCGGGTCAGCCAGATATTAGCAAGGCTGTTGTAAATATTGAAGAAAATGCTCAAGGGAAATATCGTCTTTATGAACCAGGATTTACCAATATATCTTTACCCTTTGTGCTTTCTTTTAGATTTGGCAAGACATATGATTCTTCTAGGGGACCTcTCCTTAATGCCATGGAGATAAACATGTATTTGGAGAAAAATGATGGTTCTCTAGATGGAGCAACTATTTCCAATATACTTTCACACTACTCTGCAGAAGACTGGGCCCAAGAAGGTGGTGATCCATGTTTGCCTGTTCCATGGTCATGGGTTCGATGTAACTCTGATCCACAACCAAGAATAGTTTCAATATTGTTATCCAATAAAAACTTGACTGGAAATATTCCTATGGATATCACCAAGTTGGTTGGTTTGGTTGAACTATGGCTTGATGGAAATATGTTGACTGGTCCATTTCCAGATTTTACTGGATGCATGGACTTAAAGATCATTCATCTTGAAAACAATCAATTGACAGGCGTGCTCCCAACCTCTTTGACAAACCTTCCTAGCTTGAGAGAACTGTATGTGCAAAATAATATGTTATCAGGAACAATACCATCAGAACTTCTAAGCAAAGATTTGGTTTTGAACTACTCTGGAAACATTAATCTTCACAGAGAAAGCAGAATAAAGGGACACATGTATGTTATTATTGGTTCATCAGTTGGAGCTTCTGTTCTACTTTTGGCTACTATTATATCTTGCTTGTATATGCGTAAAGGGAAGAGAAGATATCATGAGCAAGATCGCATTGATTCTCTCCCTACTCAAAGGCTGGCTTCTTGGAAGAGCGATGATCCTGCAGAAGCTGCTCACTGCTTCAGTTTTCCGGAAATTGAAAATGCTACAAATAACTTTGAGACAAAAATTGGTTCTGGTGGTTTTGGAATTGTATACTATGGCAAGCTAAAAGATGGAAAAGAGATAGCAGTTAAAGTTTTAACCAGTAATTCCTATCAAGGCAAGCGAGAGTTCTCCAACGAGgttacccttctttcaagaatacatcacagaaatttggtacagctgcttgggtattgccgagatgaagagagtagtatgcttgtttatgagttcatgcataatggcactctcaaggaacatctttatgGCCCATTAGTGCATGGACGGAGTATCAATTGGATTAAGCGCCTAGAGATTGCAGAAGATGCTGCCAAAGgaattgaatatcttcatacaggttgcattcctgtcgttatccatagagacttaaaaagcagcaatattcttctcgacaagcacatgagagccaaggtttcagattttggtctttcaaaacttgctgttgatggagtttcccatgtttcaagcatagttcgggggacagtaggatatttggatcctgagtactatatttcccagcagctgactgacaagagtgatgtttatagttttggtgtaattcttcttgaactcatatctggtcaagaagcaatatcGAATGAAAGCTTTGGTGTAAATTGCCGAAACATAGTCCAATGGGCAAAATTACACATTGAGAGTGGAGATATACAGGGTATTATCGACCCCTTGCTGCGGAATGACTATGACCTTCAATCGATGTGGAAAATAGCAGAGAAAGCATTCATGTGTGTTCAGCCCCACGGACATATGCGGCCAACGATTTCAGAAGTTATAAAGGAGATCCAAGATGCAATATCTATTGAGAGACAGGCAGAAGCATTAAGAGAAGGCAATTCAGATGACATGTCAAAACATTCTTTTCATTCTTCCATGAACATGGGGTCAATGGATCTAGGTGGAGCTGAGAGTTACCTGTCAATTGATGAATCAATTGCGCAGCCCACAGCAAGATAG 2802 0.3387 MESILLFFSSFKFALSLSLILHSPFSSAQIMQAGFVSLDCGGTEKFADEIGLHWTPDDKLTYGQISTISVVNETRKQYTTLRHFPADSRKYCYTLEVVSRTRYLLRASFLYGNFDDNNVYPKFDISIGPTHWSTIVISDANSIEMRELIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTQFEEHFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTEKISTTVPIDVNRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPGTGWAFTYFAEIEDLDPNESRKFRLVLPGQPDISKAVVNIEENAQGKYRLYEPGFTNISLPFVLSFRFGKTYDSSRGPLLNAMEINMYLEKNDGSLDGATISNILSHYSAEDWAQEGGDPCLPVPWSWVRCNSDPQPRIVSILLSNKNLTGNIPMDITKLVGLVELWLDGNMLTGPFPDFTGCMDLKIIHLENNQLTGVLPTSLTNLPSLRELYVQNNMLSGTIPSELLSKDLVLNYSGNINLHRESRIKGHMYVIIGSSVGASVLLLATIISCLYMRKGKRRYHEQDRIDSLPTQRLASWKSDDPAEAAHCFSFPEIENATNNFETKIGSGGFGIVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCRDEESSMLVYEFMHNGTLKEHLYGPLVHGRSINWIKRLEIAEDAAKGIEYLHTGCIPVVIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGVNCRNIVQWAKLHIESGDIQGIIDPLLRNDYDLQSMWKIAEKAFMCVQPHGHMRPTISEVIKEIQDAISIERQAEALREGNSDDMSKHSFHSSMNMGSMDLGGAESYLSIDESIAQPTAR 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01638 933 Pfam Protein tyrosine and serine/threonine kinase 607 807 IPR001245 GO:0004672|GO:0006468
Gma03g01638 933 Gene3D Phosphorylase Kinase; domain 1 581 680 - -
Gma03g01638 933 Gene3D Ribonuclease Inhibitor 381 532 IPR032675 -
Gma03g01638 933 PANTHER TYROSINE KINASE DOMAIN PROTEIN 19 933 - -
Gma03g01638 933 CDD STKc_IRAK 611 878 - -
Gma03g01638 933 ProSiteProfiles Protein kinase domain profile. 605 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01638 933 SMART serkin_6 605 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01638 933 SUPERFAMILY L domain-like 406 519 - -
Gma03g01638 933 ProSitePatterns Serine/Threonine protein kinases active-site signature. 727 739 IPR008271 GO:0004672|GO:0006468
Gma03g01638 933 Gene3D Transferase(Phosphotransferase) domain 1 681 903 - -
Gma03g01638 933 SUPERFAMILY Protein kinase-like (PK-like) 590 875 IPR011009 -
Gma03g01638 933 Pfam Leucine rich repeat 462 502 IPR001611 GO:0005515
Gma03g01638 933 ProSitePatterns Protein kinases ATP-binding region signature. 611 633 IPR017441 GO:0005524
Gma03g01638 933 PANTHER OS07G0107800 PROTEIN-RELATED 19 933 - -
Gma03g01638 933 Pfam Malectin-like domain 38 367 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01638 Gma-Chr3 42514673 42521268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01638 25 715 Receptor kinase-like Gene Family AT2G37050 69.054 0.0 1008
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gma03g01638 Malectin_like 1.1e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01638 - - gmx:100808740 1862.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01685 19 46164167 46171312 Gma03g01638 03 42514673 42521268 GST
Gma03g01638 03 42514673 42521268 Gma10g00458 10 4449868 4457011 PCT
Gma03g01638 03 42514673 42521268 Gma13g01168 13 25854068 25861066 PCT
Gma10g00458 10 4449868 4457011 Gma03g01638 03 42514673 42521268 PCT
Gma13g01168 13 25854068 25861066 Gma03g01638 03 42514673 42521268 PCT