Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01635 ATGGCAATGGCGCCTTCAACTTCCAATAGTGGGTCTGGAAAGAAGGTTAGAAAGCCTTATACTATTACCAAGTCAAGGGAGAGCTGGTCCGAGGAAGAACACGACAAGTTTCTCGAAGCTCTTCAACTatttgacagagattggaagaaaattgaagattttgttggttcaaaaacagttattcagatcagaagtcatgcccagaagtacttcttgaaagttcaaaagaacggggcagtagcacacgtgcctcctcctcggcctaagcgtaaagcttctcatccttatccacaaaaggcatccaaaaatgttttgttgccattgccagcttccatggcttatgtttcttccactagtacccttccacctgggtatgtcacatgggatgaaaattccttgctcatgaattctggatccaacaaatcagtgccttgtaatgatgagctcgcctatcttcttggaaatgaaggcatgcatgcttcttttactgatattggatcaaaggggataacacgaattggtcacagcagtcctagtggtgttgggaactctactagaaatctgcctgctactgagatggcaaaacaagggaaacaggctcaggtgattcatgGTTTGCCAGATTTTGCTGAAGTTTACAGCTTCATTGGAAGTGTTTTTGATCCAGACACAAAAGGTCATGTCCAGAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAAAAACCTCACTGTCAATTTGTCTAGTCCTGACTTTGAGCCAGTTAGGAAGGCCATGTCATCATACGATGTCAATACAAATACAGTAGGAGTTACCGCAGGAATCGACGTCAAGAAGCAGACAAATGATCTATCATGTCAAACAGCTTGA 888 0.1869 MAMAPSTSNSGSGKKVRKPYTITKSRESWSEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGAVAHVPPPRPKRKASHPYPQKASKNVLLPLPASMAYVSSTSTLPPGYVTWDENSLLMNSGSNKSVPCNDELAYLLGNEGMHASFTDIGSKGITRIGHSSPSGVGNSTRNLPATEMAKQGKQAQVIHGLPDFAEVYSFIGSVFDPDTKGHVQKLKEMDPINFETVLLLMKNLTVNLSSPDFEPVRKAMSSYDVNTNTVGVTAGIDVKKQTNDLSCQTA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01635 295 ProSiteProfiles Myb-like domain profile. 21 71 IPR001005 -
Gma03g01635 295 MobiDBLite consensus disorder prediction 1 30 - -
Gma03g01635 295 SMART sant 25 73 IPR001005 -
Gma03g01635 295 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 24 73 IPR006447 GO:0003677
Gma03g01635 295 MobiDBLite consensus disorder prediction 1 16 - -
Gma03g01635 295 PANTHER SWI/SNF COMPLEX-RELATED 3 289 - -
Gma03g01635 295 CDD SANT 28 71 IPR001005 -
Gma03g01635 295 Pfam Myb-like DNA-binding domain 26 71 IPR001005 -
Gma03g01635 295 PANTHER PROTEIN REVEILLE 8 3 289 - -
Gma03g01635 295 Gene3D - 29 76 - -
Gma03g01635 295 SUPERFAMILY Homeodomain-like 20 76 IPR009057 -
Gma03g01635 295 ProSiteProfiles SANT domain profile. 24 77 IPR017884 -
Gma03g01635 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 75 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01635 Gma-Chr3 42471119 42474233 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma03g01635 Myb_DNA-binding 1.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01635 - - gmx:100807156 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01682 19 46119271 46122790 Gma03g01635 03 42471119 42474233 GST
Gma03g01635 03 42471119 42474233 Gma10g00455 10 4404718 4409379 PCT
Gma03g01635 03 42471119 42474233 Gma13g01162 13 25812162 25819078 PCT
Gma10g00455 10 4404718 4409379 Gma03g01635 03 42471119 42474233 PCT
Gma13g01162 13 25812162 25819078 Gma03g01635 03 42471119 42474233 PCT