Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01629 ATGGATATCAAGGAAGCACAAAGGGTGGTCATTTCCAAACCAGTTGCTTCAAGGCCAACTTGTTCTACTTTCAAATCTTTCTCAGAGCTCCTAGCAGGTGCAATCAATGTTTCTCCCGCTATTGAATCTTCTCCAACTACAGTTTCTGCCATTAGACCAAAGACAGTGAGGTTCAAGCCAGCAATGAATCAACCCCCTGCTGGGTTTGTTTCTTCTCAGGCTGATACTTTGGGAGCTGCACTCGATAATTCTTCTGACATGAGTCCTAAACTTGACACCAAACAGTCCCTCATATACAAGCCAACAGCAAAACTCGTGTCAAAGACAACTGTGTCTCTTTTGGCAAATATGGGAAATTGCAGTACTAACACGAGCTCGAATCTCGATCAGAGTATTACCCCGCAAACAGAAACAAATTATCAGAGCAGTGAACCTAGTAAGATGGTGCAGCAGAACATAGAGGAGGACCAAAAAGCTTTAACATCCTCAGTGAATTGTGATCGACCTTCTTATGATGGATACAATTGGAGGAAATATGGTCAGAAGCAAGTGAAAGGGAGCGAGTACCCGCGAAGTTATTACAAGTGCACACATCCTAATTGTCCAGTGAAAAAGAAGGTTGAAAGATCATTTGATGGGAATATTGCAGAAATTGTTTATAAAGGTGAACACAACCATTCGAAGCCACAGCTTCATAAGCGAAACTCAGCAGCAGGGACACAAGGATCAGGGGTTATGTCTGATGGAATGGTTCAAGATATGTGGAGTAATAGTCACAGTGAGAGGAACGAAGGCAATGAAGTTAGAATTGAGAACACAGGATTGTCTATGCATTCTGATTATTATGTCAAAGTTCCACAGCCTAATGATTCTTCATTAAATATTGGTGCAACTAATGCTGGTGGAGGAAGCATGGAAAACTCTTGTGGTCTAAGTGGGGAATATGAGGAAGGAAGCAAGGGATTTGAGGCACAGGAAGATGAACACAGAAGTAAAAGAAGGAAAAATGAGAATCAATCCAATGAAGCAGCATTATCAGAGGAAGGTTTAGTAGAGCCGCGGATTGTGATGCAAAGTTTTACGGATTCTGAAGTTCTTGGAGATGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAAGGCAATCCATACCCCAGAAGTTACTTTAGATGTACTAATATCATGTGTAACGTTCGCAAACACGTGGAGAGAGCAATAGATGACCCGAGATCATTTGTGACTACATATGAGGGAAAGCACAATCATGAGATGCCACTCAAGAACACAGGAACTGTAGCATCTGAAAGAGATTCACAGGCTTCTCTTAGTAAAGATAAACCATGA 1347 0.4202 MDIKEAQRVVISKPVASRPTCSTFKSFSELLAGAINVSPAIESSPTTVSAIRPKTVRFKPAMNQPPAGFVSSQADTLGAALDNSSDMSPKLDTKQSLIYKPTAKLVSKTTVSLLANMGNCSTNTSSNLDQSITPQTETNYQSSEPSKMVQQNIEEDQKALTSSVNCDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGNIAEIVYKGEHNHSKPQLHKRNSAAGTQGSGVMSDGMVQDMWSNSHSERNEGNEVRIENTGLSMHSDYYVKVPQPNDSSLNIGATNAGGGSMENSCGLSGEYEEGSKGFEAQEDEHRSKRRKNENQSNEAALSEEGLVEPRIVMQSFTDSEVLGDGFRWRKYGQKVVKGNPYPRSYFRCTNIMCNVRKHVERAIDDPRSFVTTYEGKHNHEMPLKNTGTVASERDSQASLSKDKP 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01629 448 MobiDBLite consensus disorder prediction 295 349 - -
Gma03g01629 448 MobiDBLite consensus disorder prediction 319 341 - -
Gma03g01629 448 Gene3D WRKY domain 154 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g01629 448 Gene3D WRKY domain 352 427 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g01629 448 SUPERFAMILY WRKY DNA-binding domain 359 426 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g01629 448 Coils Coil 322 342 - -
Gma03g01629 448 PANTHER WRKY TRANSCRIPTION FACTOR 44 7 429 - -
Gma03g01629 448 MobiDBLite consensus disorder prediction 420 448 - -
Gma03g01629 448 MobiDBLite consensus disorder prediction 232 251 - -
Gma03g01629 448 MobiDBLite consensus disorder prediction 223 251 - -
Gma03g01629 448 SUPERFAMILY WRKY DNA-binding domain 169 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g01629 448 ProSiteProfiles WRKY domain profile. 361 426 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g01629 448 ProSiteProfiles WRKY domain profile. 172 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g01629 448 Pfam WRKY DNA -binding domain 368 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g01629 448 Pfam WRKY DNA -binding domain 172 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g01629 448 SMART WRKY_cls 170 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g01629 448 SMART WRKY_cls 366 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g01629 448 MobiDBLite consensus disorder prediction 124 144 - -
Gma03g01629 448 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 429 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01629 Gma-Chr3 42435626 42438613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01629 92 427 WRKY Transcription Factor Family AT2G37260 45.609 1.04e-85 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma03g01629 WRKY 2.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01629 - - gmx:100127379 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01676 19 46073750 46077951 Gma03g01629 03 42435626 42438613 GST