Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01623 ATGGTTAGATTCTGCTGGAGACCAGCTGCGGTGGGTGATGATGGAGATGTGAATGGTCGAGTTGAAGGGCTTCTATGGTACAAGGATTTGGGGAACCATCTTTATGGAGATTTCTCAATGGCTGTGATTCAAGCTAATAGTTCATTAGAGGATCGTAGCCAACTTGAATCTGGACCATTGACTTCTGACTATTTGGGTCCTCAAGGAACCTTTGTAGGTGTATATGATGGTCATGGTGGCACCGCAGCCTCGCAGTTTGTCAGTGACAATCTTTTCTGCAATTTCAAAGATTTGGCTGGTGAACATCAAGGCATATCGGAGAATGTTATACAAAGTGCCTTTTCAGCAACAGAAGAGGGTTTTCTGTCTGTTGTGAGGAAACAGTGGCTAAGCAAGCCACAGATAGCATCCGCAGGTACATGTTGTTTGGCGGGGATAATTTGCAACGGCATGCTATACGTTGCAAATGCCGGAGACTCGAGGGCGGTGTTGGGGAGAGTGGAGAGAGCAACAAGGGAAACAACAGCTATCCAATTGTCTGCAGAGCACAACGTTAACATCCAAACTGAGAGAGATGATGTTCGGACCAAGCACCCTCATGATCCACAAATCGTGGTTATGAAACACAATGTTTGGCGTGTGAAAGGCATCATACAGGTTTCAAGATCCATAGGTGATGCATATCTGAAGAAAGACGAATTTAACAGGGAGCCTCTACCGAACAAGTTTAGACTAACTGAACCCTTCTTCAAGCCAATTCTTAGTTATGAACCAGCAATATCAGTGCATAAACTTCGCCCTGAAGATCAATTTATCATCTTTGCTTCTGATGGTTTATGGGAGCAACTCAGCAACCAAGAGGTTGTGAATATAGTCAGCAACAGCCCTCGGAATGGAATTGCTAGGCGGCTTGTGAAAGCGGCGCTTCGAGTAGCGGCTAGGAAGAGAGAAATGAGAGTCTCAGACCTTCAAAAGATTGAACAAGGAGTGAGGAGACACTTCCACGATGACATTACAGTTATTGTTGTATTTCTAAATCACAAACTCATTGATAATAGCTCTCTCTTCAATTAG 1074 0.4432 MVRFCWRPAAVGDDGDVNGRVEGLLWYKDLGNHLYGDFSMAVIQANSSLEDRSQLESGPLTSDYLGPQGTFVGVYDGHGGTAASQFVSDNLFCNFKDLAGEHQGISENVIQSAFSATEEGFLSVVRKQWLSKPQIASAGTCCLAGIICNGMLYVANAGDSRAVLGRVERATRETTAIQLSAEHNVNIQTERDDVRTKHPHDPQIVVMKHNVWRVKGIIQVSRSIGDAYLKKDEFNREPLPNKFRLTEPFFKPILSYEPAISVHKLRPEDQFIIFASDGLWEQLSNQEVVNIVSNSPRNGIARRLVKAALRVAARKREMRVSDLQKIEQGVRRHFHDDITVIVVFLNHKLIDNSSLFN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01623 357 SMART PP2C_4 31 343 IPR001932 -
Gma03g01623 357 Gene3D - 28 354 IPR036457 -
Gma03g01623 357 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Gma03g01623 357 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Gma03g01623 357 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 4 356 - -
Gma03g01623 357 CDD PP2Cc 35 345 IPR001932 -
Gma03g01623 357 PANTHER ALPHABET, ISOFORM E-RELATED 4 356 - -
Gma03g01623 357 Pfam Protein phosphatase 2C 69 314 IPR001932 -
Gma03g01623 357 SUPERFAMILY PP2C-like 46 346 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01623 Gma-Chr3 42407919 42410017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01623 1 354 PP2C-type Phosphatase Gene Family AT3G12620 66.387 2.16e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01623 K01102 - gmx:100815902 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01668 19 46040936 46043957 Gma03g01623 03 42407919 42410017 GST
Gma03g01623 03 42407919 42410017 Gma10g00446 10 4293689 4296657 PCT
Gma03g01623 03 42407919 42410017 Gma13g01152 13 25689611 25691391 PCT
Gma10g00446 10 4293689 4296657 Gma03g01623 03 42407919 42410017 PCT
Gma13g01152 13 25689611 25691391 Gma03g01623 03 42407919 42410017 PCT