Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01608 atgaaccgcgcacaccttgatcctgaatccgtctccgccagatcctctcgcacctccgccaattccagcgcctccgattatgacgacgattttgcggcggaggacgacgatatccgcgccgccggcgactctatctccgaagtcgagcagaaaggcacttcaaagccggcggtgaacggcggcggcgtgcactcgctcacgattcagacgatgaattacCTTTCAGTCCTCGCCGATTATCTCAACGTGCTCTCGGATATATTTCCGCGCGACTGGCTTCCACCGCAGAAGTCGTCATCTCTGCCGGAATCTTATTTATACAGTCCAGAATCTGATTACTCGGCGTCGACGCCGGCGCTGACGGCGCGTTTTGCGTGGCTGATTCTCGTCCTCCTTTGCAAGCTCGACGGCAAAGCGAAGCATTGCAAGGACGTTTCGCTTTCTTATCTGTTTCTCGCGAACAATCTCTGGTACGTGGTGGCCAGAGTCCGAAGCTCGAACCTGCAGTACGTGCTTGGCGACGATTGGATCCTTAAGCACGAAGCTAAAGCGAAACGGTTCGTTTCGAACTACGAGAAGGtggcgtggggagaagtggtttcgtcattggcggaaaatccagccgcggcggaggcgagggcggtgttcgagaacttcaaccgcaaattcgaggaagcgtatcggaaacagaactcattcgtcgtagctgacagagaattaagagacgaaataaaaggttcgatcgcgagaagtatagtgccgagatatcgcgagtGGTATAATGTTCTTCTTGCTAAGGTTGGATCAGTGAGGGACTTGACGGCGACGGAGTACGTGACGTTTACCCCTGAGGATATTGAAAATTACCTCGTTAACCTCTTCTTTTTTGGAACCTCATCCAGTGCTGTATCGTCCTCGTCGGTATCGTCGTCCCCTCTCCGGCTTTGGAGTTAA 954 0.2904 MNRAHLDPESVSARSSRTSANSSASDYDDDFAAEDDDIRAAGDSISEVEQKGTSKPAVNGGGVHSLTIQTMNYLSVLADYLNVLSDIFPRDWLPPQKSSSLPESYLYSPESDYSASTPALTARFAWLILVLLCKLDGKAKHCKDVSLSYLFLANNLWYVVARVRSSNLQYVLGDDWILKHEAKAKRFVSNYEKVAWGEVVSSLAENPAAAEARAVFENFNRKFEEAYRKQNSFVVADRELRDEIKGSIARSIVPRYREWYNVLLAKVGSVRDLTATEYVTFTPEDIENYLVNLFFFGTSSSAVSSSSVSSSPLRLWS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01608 317 Pfam Exo70 exocyst complex subunit 44 290 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma03g01608 317 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 50 - -
Gma03g01608 317 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 50 301 - -
Gma03g01608 317 SUPERFAMILY Cullin repeat-like 50 294 IPR016159 -
Gma03g01608 317 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 50 IPR004140 GO:0000145|GO:0006887
Gma03g01608 317 PANTHER EXOCYST COMPLEX PROTEIN EXO70 50 301 IPR004140 GO:0000145|GO:0006887
Gma03g01608 317 Gene3D Exocyst complex component Exo70 18 302 - -
Gma03g01608 317 MobiDBLite consensus disorder prediction 1 33 - -
Gma03g01608 317 MobiDBLite consensus disorder prediction 9 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01608 Gma-Chr3 42290109 42291626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01608 50 294 EXO70 exocyst subunit family AT3G09520 51.383 4.31e-75 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01608 K07195 - gmx:100810548 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01654 19 45923210 45925066 Gma03g01608 03 42290109 42291626 GST
Gma03g01608 03 42290109 42291626 Gma10g01184 10 33931577 33947600 PCT
Gma03g01608 03 42290109 42291626 Gma20g00717 20 27493865 27545995 PCT
Gma10g00431 10 4144430 4146298 Gma03g01608 03 42290109 42291626 PCT
Gma13g01139 13 25548335 25550215 Gma03g01608 03 42290109 42291626 PCT