Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01605 ATGCAGAGACCTAAAGGAAGCAAGCGGGTTCATAGACATAGAAAACTTCAGAGTTTTCCTTCTGATTCAAGTTCTTGCGGTGATGGAGTTGCAGATGAAGATTCGAATTCATTTCAATCCTGGAGATCTTCAAAACAATCGTTTGGAACTCCCATGAAGAAGTTATTAGCAGAAGAACTGTCCCAAGAAACTGAACCCAAAAGAAGAGCTCCAGGTGTCATAGGCAAATTAATGGGTCTTGATGGGTTTCCATTGCAGTTGCCTACATATAAGCATCATAAGGGTGTGTCAGAAAACAATACAAAAGGGACAACACAGGCGGCAAAAACTCGAAGCAGTGGTACATTATCTGGCGGTCAATTGTCTAGGAGAAACTCAAAGCATCAGCAAGAGTTTAAGGATGTGTTTGAGGTCTCAGAGATCCCAAAGATAGATAGCTGTAGGTATTCATTGCAAGGATCTGTAGGGTTGAAGATCACCAATGCTGAGATGTCATTTGTTGAACAGAAGCTCATGGATGCCAAACGCCGAGCAACTTATCAGGATTTACAATCTTCGCAGGATTCCCATGATACACTTGAGATTCTTGACTCTAACCATGATCTTCAGCAAAAATACTTTAAGAGGCCAGATTCTTTGTTTAAAAGGCATCTAGATGATCTGCAAGCTGCCCCTTCCCAATCACATTTTGGTCACGTTGAAGGTACTAAATCATCAAACATAGTGAACTGTGAACACAATGACTTCAGCCGGAAGCCAGATAAGGAGATGAAATGGTTGAATTACAATAGATCTAACCAGAGGCATGATGATGGTTATTCTTGTCATTTTGTCAGAAGACATGCTATTCACAGTTCTCCTAAATCATCAAGGAATCAGTTTAAGGGAAAAAATGTGCCCAATGCAGTCCCAACAAGGATTGTTGTACTAAAACCCAATCTTCAAAAAGTGCAAAGTCCTACCAAAATTGGTTCATCACCTTGTTCTCCATATGCTTTCCTGTCTCAATGTGGAAAGCATGCTGAATTTTCAGATATCAGATTTAGGGAAACTGGACTGAATCAAAGGAAAAATTTGACTGCTAATGCCTGGCATTCAAAGCAAAATTCTTTGGAATCAAGAGAAATTGCAAAGGAAATCACAAGCCAAATGAAAAATAGTTTGAATATTGGCTCCATGATATTTTCATCTTCTAGATTTAGAGGATATACTTGGGATGATAGCTCATGTAGTCTTTCTGGGAATCAATCTCCTGATGAATCAGAGGTGACACCTGCAACCTTGGAAAAGTCATTTGAAATATGTAACACTATTAGTCCATCATCTTGTTTTAGTGAATCATTTGTGAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGTCGCTGAAGTCTCAACAAGGCAATTCCATCTCCAGGAGTGGCACACTGGCTGAAATGCTCGCTATCCCTAACAAGGAAATGAAGGCATCTAAATTTGACAGCATCTCTTGTGGGGAAGGTTCACACGATAAAATATCTAGCAATGGTAAACCTGCTGGGTGGGTCGAACCATTGGGTGTTAGCAGTAAGGATGGATATATTGGAAGTTTACCAAGGTCTAAATCACTTCCTGCTTCATCTACTACCTTTGGAAGTCCCAGAACAATATTGCACCATGAAGCACTTTGTGATGATCGATTTATGATGCCAAAGGAAGCTAGTAAACAGGAAAAGAAAAAAGTAGTGAAGCGTCTTGATCAGAGACCGTGTACAAATACCAAAAGGTCAAAATCTGGTCACAAGAAGTGTTCCCCATTCTTAAATACAATTCAAAACAAAGTGAAGATTAATCTTGAAGAGAATTTGCCCAAGCAAGAAGTGTTGATTGCTGAATCATTAGCTGAGATCCTCAGAGATACAAGTGCAGTTACTGAAGAAGTTGTTGGTGTGACCAATGAAAATGCAGTTGGTTCATCTGAATCTTCTATTAAGGAGTTATCAGTTGGGTCTTCCAGTAGAAATTATGACCCCTTGCAACCACCTGTATCTGGACTTGATTCTGCATGCTGTATAGGTGCAGATCAACCCAGTCCAGTCTCGGTGCTAGAACCTTCTTTTACAGATGATCTGTCACCTTGTTTAGATTATTTTGAAAGTCTCAATGTTGACATACAAGGGCTTCGAATGCAACTCCAGTTGCTGAAGCTGGAATCTGAAGATTTTGTGGAAGAACCCGTGCTAATTCAAAGTGATGAAGATGGTATGGAGGCATCTACTGGAATTTCAGAAGACAGTGGATTGCTTCAGACTAGAGATAGCTGGGAGTCTTCCTACACCATTGATGTCTTGTATGAATCTGGTATTGATAGAGCTCAACCTGATGCATTTTTGGAAGTTGGGGATTCTAGAGAATACCCTGTTAGTCTTTCAGTGTTTGGTGAACTTGAAAAGAGGTACTCTGATTGGACTAATTGTTCAAGGTCTGAAAGGAGATTGCTTTTTGATCGTATAAATTTGGGAATTATCAGTATATACGAGCAATTCACGAGTGTACAACCATGGGTAAGCTCTACTACATCCTTAAATCTTTGTTCTAAATTGATTAAAAATGGACTCCAAGACTGTCTTAACATGATGCTGGGGAGCCAAGGAAAAGCAAAGTATACCGCAATGGGAAAGGTGCTGGTTAGCGAATTGCAGTGGTTGAGCTTAAGAGATGACATTGATGGAATAGGTAGGGAAGTTGAGAGCTTGCTACTAGATGATCTGGTGGCAGAGATAGCCGTTACATAG 2781 0.4009 MQRPKGSKRVHRHRKLQSFPSDSSSCGDGVADEDSNSFQSWRSSKQSFGTPMKKLLAEELSQETEPKRRAPGVIGKLMGLDGFPLQLPTYKHHKGVSENNTKGTTQAAKTRSSGTLSGGQLSRRNSKHQQEFKDVFEVSEIPKIDSCRYSLQGSVGLKITNAEMSFVEQKLMDAKRRATYQDLQSSQDSHDTLEILDSNHDLQQKYFKRPDSLFKRHLDDLQAAPSQSHFGHVEGTKSSNIVNCEHNDFSRKPDKEMKWLNYNRSNQRHDDGYSCHFVRRHAIHSSPKSSRNQFKGKNVPNAVPTRIVVLKPNLQKVQSPTKIGSSPCSPYAFLSQCGKHAEFSDIRFRETGLNQRKNLTANAWHSKQNSLESREIAKEITSQMKNSLNIGSMIFSSSRFRGYTWDDSSCSLSGNQSPDESEVTPATLEKSFEICNTISPSSCFSESFVSREAKKRLSERWKMSLKSQQGNSISRSGTLAEMLAIPNKEMKASKFDSISCGEGSHDKISSNGKPAGWVEPLGVSSKDGYIGSLPRSKSLPASSTTFGSPRTILHHEALCDDRFMMPKEASKQEKKKVVKRLDQRPCTNTKRSKSGHKKCSPFLNTIQNKVKINLEENLPKQEVLIAESLAEILRDTSAVTEEVVGVTNENAVGSSESSIKELSVGSSSRNYDPLQPPVSGLDSACCIGADQPSPVSVLEPSFTDDLSPCLDYFESLNVDIQGLRMQLQLLKLESEDFVEEPVLIQSDEDGMEASTGISEDSGLLQTRDSWESSYTIDVLYESGIDRAQPDAFLEVGDSREYPVSLSVFGELEKRYSDWTNCSRSERRLLFDRINLGIISIYEQFTSVQPWVSSTTSLNLCSKLIKNGLQDCLNMMLGSQGKAKYTAMGKVLVSELQWLSLRDDIDGIGREVESLLLDDLVAEIAVT 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01605 926 PANTHER AFADIN 6 924 - -
Gma03g01605 926 Coils Coil 713 733 - -
Gma03g01605 926 MobiDBLite consensus disorder prediction 1 15 - -
Gma03g01605 926 Pfam Domain of unknown function (DUF4378) 773 922 IPR025486 -
Gma03g01605 926 MobiDBLite consensus disorder prediction 19 50 - -
Gma03g01605 926 PANTHER AFADIN 6 924 - -
Gma03g01605 926 MobiDBLite consensus disorder prediction 1 70 - -
Gma03g01605 926 MobiDBLite consensus disorder prediction 95 128 - -
Gma03g01605 926 Coils Coil 157 177 - -
Gma03g01605 926 MobiDBLite consensus disorder prediction 99 125 - -
Gma03g01605 926 Pfam Protein of unknown function (DUF3741) 168 212 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01605 Gma-Chr3 42260406 42265505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01605 45 925 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 34.524 5.73e-122 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01605 - - gmx:100801297 1812.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01651 19 45892871 45895852 Gma03g01605 03 42260406 42265505 GST
Gma03g01605 03 42260406 42265505 Gma10g00427 10 4104849 4110578 PCT
Gma03g01605 03 42260406 42265505 Gma13g01134 13 25495579 25501082 PCT
Gma10g00427 10 4104849 4110578 Gma03g01605 03 42260406 42265505 PCT
Gma13g01134 13 25495579 25501082 Gma03g01605 03 42260406 42265505 PCT