Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01577 atggccggaaaaggagagggtcctgctatcggaatcgatctcggaaccacctactcttgcgtcggtgtgtggcaacatgaccgcgttgaaatcatcgccaacgaccaggggaacagaaccacgccgtcttacgtcggattcactgacaccgagcgtctcatcggtgatgcggccaagaatcaagtcgccatgaaccccatcaacaccgtcttcgatgccaagaggttgattggtcgtagattcagtgattcctctgttcagagtgatatcaaattgtggcctttcaaggtcattcctggtgctgctgacaagccaatgatcgtggttaactacaagggtgaagagaagcaatttgccgcagaagaaatctcttccatggtgctcatcaagatgcgtgagattgctgaggcttacctaggctccacagtgaagaatgctgttgtcaccgtccctgcttacttcaatgattctcagcgtcaagctaccaaagacgctggtgtcattgctggtctaaatgtgatgcgaattatcaatgagcctactgcagctgccattgcatatggtcttgataagaaggccacgagtgttggtgagaagaatgtgttgatttttgaccttggtggtgggacatttgatgtgtctttactcaccattgaggagggtatctttgaggtgaaagccactgctggtgacacccatcttggaggtgaagattttgataacaggatggtgaaccactttgttcaagagttcaagagaaagaacaagaaggacattagtggaaaccccagagcaCTTAGAAGGTTGAGGACTGCTTGTGAGAGGGCCAAGAGAACACTTTCATCGACTGCTCAGACCACCATTGAAATTGATTCTCTATACGAGGGAATTGATTTCTACTCCACTGTTACTCGTGCCAGATTTGAGGAGCTCAACATGGATCTCTTCAGGAAATGTATGGAGCCGGTGGAGAAATGTTTGAGGGATGCTAAGATGGACAAAAGAAGTGTTGATGATGTTGTCCTTGTTGGTGGTTCTACCAGAATTCCCAAGGTTCAACAACTGCTGCAGGACTTCTTTAATGGAAAAGAGCTTTGCAAGAGCATTAATCCCGATGAGGCTGTTGCATATGGTGCTGCTGTTCAGGCTGCAATCTTAAGTGGTGAGGGCAATGAGAAGGTTCAGGATCTTCTCCTCCTGGATGTCACCCCTCTGTCTCTTGGTTTGGAGACTGCCGGTGGTGTGATGACTGTCCTGATCCCTAGGAACACTACAATTCCAACAAAGAAGGAACAAGTTTTCTCAACATACTCTGACAACCAGCCTGGTGTGCTTATCCAGGTCTTTGAGGGTGAAAGAGCAAGGACCAGAGATAACAATTTGTTGGGCAAATTTGAGCTATCTGGCATTCCTCCTGCACCCAGGGGTGTTCCTCAGATTACAGTGTGCTTTGACATTGATGCCAATGGTATCTTGAATGTCTCTGCCGAAGATAAAACCACTGGCCAGAAAAATAAGATCACTATCACCAATGACAAGGGTAGATTGTCAAAGGAAGATATTGAGAAGATGGTTCAAGAGGCTGAGAAGTACAAGTCTGAGGATGAAGAGCACAAGAAGAAGGTTGAGGCCAAAAACGCTTTGGAAAACTATGCATACAACATGAGGAACACCGTGAAGGATGACAAGATTGGTGAGAAACTTGACCCGGCTGACAAGAAGAAGATTGAGGATGCAATTGAGCAGGCAATCCAGTGGTTAGACAGCAACCAGCTTGCAGAAGCAGATGAGTTTGAGGACAAAATGAAGGAATTGGAAAGCATCTGCAATCCAATCATTGCCAAGATGTACCAAGGTGGTGCTGGTCCAGACGTGGGTGGTGCTGGTGCAGCAGAGGATGAGTATGCTGCTCCTCCTTCTGGTGGAAGTGGTGCTGGCCCCAAGATTGAGGAAGTGGACTAA 1962 0.2747 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDSSVQSDIKLWPFKVIPGAADKPMIVVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTVTRARFEELNMDLFRKCMEPVEKCLRDAKMDKRSVDDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDDKIGEKLDPADKKKIEDAIEQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGGAGPDVGGAGAAEDEYAAPPSGGSGAGPKIEEVD 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01577 653 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Gma03g01577 653 Gene3D Actin; Chain A, domain 4 235 318 - -
Gma03g01577 653 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Gma03g01577 653 Coils Coil 521 541 - -
Gma03g01577 653 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Gma03g01577 653 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Gma03g01577 653 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Gma03g01577 653 PANTHER HEAT SHOCK PROTEIN 70KDA 1 628 IPR013126 GO:0005524|GO:0140662
Gma03g01577 653 PRINTS 70kDa heat shock protein signature 8 21 - -
Gma03g01577 653 PRINTS 70kDa heat shock protein signature 36 48 - -
Gma03g01577 653 PRINTS 70kDa heat shock protein signature 58 66 - -
Gma03g01577 653 PRINTS 70kDa heat shock protein signature 146 166 - -
Gma03g01577 653 PRINTS 70kDa heat shock protein signature 209 219 - -
Gma03g01577 653 PRINTS 70kDa heat shock protein signature 337 353 - -
Gma03g01577 653 PRINTS 70kDa heat shock protein signature 369 389 - -
Gma03g01577 653 PRINTS 70kDa heat shock protein signature 396 415 - -
Gma03g01577 653 PRINTS 70kDa heat shock protein signature 477 493 - -
Gma03g01577 653 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Gma03g01577 653 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Gma03g01577 653 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 545 IPR029047 -
Gma03g01577 653 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Gma03g01577 653 Gene3D - 546 619 IPR029048 -
Gma03g01577 653 MobiDBLite consensus disorder prediction 619 653 - -
Gma03g01577 653 Gene3D - 192 366 - -
Gma03g01577 653 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 628 - -
Gma03g01577 653 Gene3D - 71 126 - -
Gma03g01577 653 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Gma03g01577 653 Gene3D - 10 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01577 Gma-Chr3 42049249 42052324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01577 1 653 Calmodulin-binding Proteins AT3G12580 91.577 0.0 1218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01577 K03283 - gmx:100798307 1250.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01577 03 42049249 42052324 Gma19g01629 19 45711360 45714358 ECH
Gma03g01577 03 42049249 42052324 Gma03g01577 03 42049249 42052324 ECH
Gma03g01577 03 42049249 42052324 Gma12g00569 12 4778943 4781861 ECH
Gma19g01629 19 45711360 45714358 Gma03g01577 03 42049249 42052324 GST
Gma03g01577 03 42049249 42052324 Gma13g01110 13 25281936 25285036 PCT
Gma13g01110 13 25281936 25285036 Gma03g01577 03 42049249 42052324 PCT