Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01568 ATGGCACATCAAAACTTGGGCACCAAATTAACAGCACTTGTAGTAGATGACAATAAAATCAACCGAAAGATTCATCAAAAGCTGTTGGAGAGTGTTGGAATGAAAAATCAAGGAGTGGAAAATGGCCAAGAAGCAGTGGACATTCATTGCCATGGACAAAGATTTGACCTGATTCTCATGGACATGGATATGCCCATCATGAATGGCATTGAGGCAACAAAGGAACTTCGCTCAATGGGCATTGGTAGCATGATTGTTGGTGTATCATCACGCTGTACGGAAGCAGAAATACGAAAATTTATGGAAGCGGGACTGAATGACTACCATGAGAAACCCTTGAACAATTCTAAGCTTAGTTCACTTCTTGATAAGATCAACCCCAGTTTTACTCGTAATTAG 399 0.406 MAHQNLGTKLTALVVDDNKINRKIHQKLLESVGMKNQGVENGQEAVDIHCHGQRFDLILMDMDMPIMNGIEATKELRSMGIGSMIVGVSSRCTEAEIRKFMEAGLNDYHEKPLNNSKLSSLLDKINPSFTRN 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01568 132 SMART REC_2 10 122 IPR001789 GO:0000160
Gma03g01568 132 CDD REC_hyHK_CKI1_RcsC-like 13 122 - -
Gma03g01568 132 Pfam Response regulator receiver domain 13 121 IPR001789 GO:0000160
Gma03g01568 132 SUPERFAMILY CheY-like 9 125 IPR011006 -
Gma03g01568 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 129 - -
Gma03g01568 132 Gene3D - 2 129 - -
Gma03g01568 132 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 129 - -
Gma03g01568 132 ProSiteProfiles Response regulatory domain profile. 11 126 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01568 Gma-Chr3 41974958 41975480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01568 10 122 Response Regulator Gene Family AT3G04280 46.957 1.22e-30 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma03g01568 Response_reg 1.4e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01568 - - gmx:100794931 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01568 03 41974958 41975480 Gma03g01568 03 41974958 41975480 ECH
Gma19g01621 19 45659644 45660257 Gma03g01568 03 41974958 41975480 GST