Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01564 ATGAATGGAGTGCAGAACAGAAGGGTTCACAATGTTGAGAAACCTTTTCCAGGATGCCTGGGAAGAGTGGTGAATCTCTTTGATTTGACCGGGGGTGTAAATGGAAACAAGCTACTCACAGACAGGCCTCATCGCGATGCATCTTCACTCTCCAGAAGTCAATCAGATGTTGCAAGGATCATGAGTCCTACCTTGGGTGATCAGATAGAGGATAAGCTGATTGTTTCTGACTCAATGAGAGCTACAAATAAGAAAATAAATGGAACACCCATCAAGATGCTCATAGACCAAGAAATGTCCAAAGAAGTTGTTTCCAAGCACAATCCACCACCAAATGTAGTTGCAAAATTAATGGGGCTTGAAGCCCTCCCACAGGGTGAGCTATCTGTGGAGAGAAGCCATAGAGGAGATTATTCTCAACATATGTGTGGTCATTCAGGGACACCATTCAACCACTGGAACCTGGAAGATAGGTTTATGGACAAGGAAATGCTTCATGAAGTTCATCCAAACACAGAACAGATTGCTTATAAAGATATTTATGAAATATGGCTGCAATCACAGAGAACAAGCAATGTAAGAGACAAGACACCGGAGAGAGAAAAGTGGACTGAAGATGTTAATGGGAAGAAAATGGCTCTTATTCGCCAGAAATTTATGGAAGCTAAACGTCTGTCTACAGATGAGAGACTACGCCAGTCCAAGGAGTTTGAAGATGCCTTGGAAGTTTTAAGTTCCAATAATGATCTGTTAGTCAGGTTATTGGATTCTCAAAATCTTTATGAACTTCAGTCTACTCCAGTAGCAGAGACAAAGCGTATTACTGTTCTTAAACCTTCGAAGATGGTTGACAATGAAAATTCTGGTGGAAAGGGGAAGAAAAACGACAAGCAGATTAAGAAACCAGCAAATGTTGGTGCTGGATGGGAGAAATACAGTCCTGCATACTCCCCAGCCAGTCAGAAAATTGACGAGTTTGCAGTTCAACCTACTCGAATAGTGGTATTGAAGCCTAGCCCTGGGAAGGCACATGAGATTAAGGCTGTGTCTTCTCCTACTATGTCATCACCTCGAAATCTGCAGAGTGGAAATTTCTACCAAGAACCTGAGGATGATGATGATGTACTGGAATCAAGAAAAGTGCCAAGTCAAATTACACAACAAATGCATGAAAATCTGAGGAGCCATCAAAGAGATGAAATATTGTATTCTTCAGTATTCTCCAATGGCTATACTGGTGATGAGAGTTCATTCAACAAATCAGATCATGAGTACACTGCTGGGAATTTCAGTGATTTGGAAGTTATGTCCCCATCTCCAAGACATTCTTGGGATTACATCAATCGCAGTGGCAGTCCTTTTTCTTCATCATCCTTCAGCCGTGCATCCTGTTCTCCTGAGTCGTCAGTTTGCAGAGAGGCCAAGAAACGACTTTCTGAAAGATGGGCCATGATGTCAAATAAGGGTTCTCAAGAACAAAGGCATATGCGTAGAAGCTCTACCTTGGGTGAGATGCTTGCTCTTTCGGATATAAAGAAATCTGTAATATCTGAGCTTGAGGGTATTCATAAAGAACAGGAACCAAGTGAATCTGTTTCTTGTAGTCGAAATTTTAAAGCGGAAACATGTATGGATGGTTCTCCTAGAAACCTTTCTAGGTCAAAATCTGTTCCAACATCTTCTACTGTCTATGAAAATGGGCTCAACGTTGAAGTTTGTGATAATGATGCTGGCAAAGCACATGGGTCTGGGGAGCTGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTACAAGTTTCTTCTTCTCAAGGAATAAGAAACCATCCAGAGAAAAATCTTGTCTATCTCAATCTGTTGATGAATCCCAATCCACTGCCATTGAAACATCAGATTCTCCAGTGAATTCATCTAGAGTCCTTAGGGATGATGTGTCTCAAAGCTTCGACAGTGGATCCATCGGAGAGTGTTCTCTTCCAGCTCCATATGAATCATCAGGCAAAATTTTATCAGATTCTATCTCTAATGGACAAGGTGCTGTACCACTGGAGGCTGGATTGACTCTGTCAAAGTCCATGGTGCCTGGGATTTCAAGCGAAAACCAGGATCAGCCCAGTCCAATTTCAGTTTTAGAGCCTCCATTTGAAGATGATAATGCTGTTGTCGAGTCCTTGGGCTGTGTGAGGGGTGGTCAGCTGGGATCACGGGTGTCTCTGAAGTCTAATTTAATTGACAAATCACCACCAATAGAATCAATAGCCCGGACCCTCTCATGGGATGATTCTTGTGCAGAGGTGGCAAGTCCATACCCATTAAGGCCCTCATCGGCATCCTTAGACACTAAGCAAGACTGGCTTGTCTTTGTCAAGAAACTTCTATCAGCTGCTGGAATTGATGATCAAGTGCAGCCCGGCTCGTTTTACTCGAGATGGCATTCCCTTGAAAGCCCATTGGATCCATCATTGAGGGACAAATACGCCAATCTCAATGACAAGGAGCCTCAGCAGCAACTCCACGAGGCCAAGCGAAGGCAGAGGAGGTCCAATCAGAAGCTTGTATTCGATTGTGTGAATGTCTCACTAATAGAAATTACTGGTTATGGATCAGAGAAGAATTACTTGATGGGTAGTATGTTGTGCAGTGGGAGCCACAGCAGGGTCCAAGTCCCAGAAGCTGCATCTCCCCCATTGGTGGACCTCATTGTGGCACAGATGAAGGAGTTAATATCTAGTGCTATGAGTTCTGTTTGGGTGGTGGATTGTGGGGACAGTAACAGCCTGGTGGTAGAGAGTGTTGTCAGAAAAGAGGTTGTGGGCAAAGGGTGGGTTGAGCTTATGGGATTGGAGATGGATATTTTGGTGAAGGAAGTAGAGGGGAAGCTGCTAGAAGAACTTGTGGAGGATGCGGTGGTTGATTTGACAGGCAGGGCCTGA 2940 0.4344 MNGVQNRRVHNVEKPFPGCLGRVVNLFDLTGGVNGNKLLTDRPHRDASSLSRSQSDVARIMSPTLGDQIEDKLIVSDSMRATNKKINGTPIKMLIDQEMSKEVVSKHNPPPNVVAKLMGLEALPQGELSVERSHRGDYSQHMCGHSGTPFNHWNLEDRFMDKEMLHEVHPNTEQIAYKDIYEIWLQSQRTSNVRDKTPEREKWTEDVNGKKMALIRQKFMEAKRLSTDERLRQSKEFEDALEVLSSNNDLLVRLLDSQNLYELQSTPVAETKRITVLKPSKMVDNENSGGKGKKNDKQIKKPANVGAGWEKYSPAYSPASQKIDEFAVQPTRIVVLKPSPGKAHEIKAVSSPTMSSPRNLQSGNFYQEPEDDDDVLESRKVPSQITQQMHENLRSHQRDEILYSSVFSNGYTGDESSFNKSDHEYTAGNFSDLEVMSPSPRHSWDYINRSGSPFSSSSFSRASCSPESSVCREAKKRLSERWAMMSNKGSQEQRHMRRSSTLGEMLALSDIKKSVISELEGIHKEQEPSESVSCSRNFKAETCMDGSPRNLSRSKSVPTSSTVYENGLNVEVCDNDAGKAHGSGELTKSKSMKSSFKGKVTSFFFSRNKKPSREKSCLSQSVDESQSTAIETSDSPVNSSRVLRDDVSQSFDSGSIGECSLPAPYESSGKILSDSISNGQGAVPLEAGLTLSKSMVPGISSENQDQPSPISVLEPPFEDDNAVVESLGCVRGGQLGSRVSLKSNLIDKSPPIESIARTLSWDDSCAEVASPYPLRPSSASLDTKQDWLVFVKKLLSAAGIDDQVQPGSFYSRWHSLESPLDPSLRDKYANLNDKEPQQQLHEAKRRQRRSNQKLVFDCVNVSLIEITGYGSEKNYLMGSMLCSGSHSRVQVPEAASPPLVDLIVAQMKELISSAMSSVWVVDCGDSNSLVVESVVRKEVVGKGWVELMGLEMDILVKEVEGKLLEELVEDAVVDLTGRA 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01564 979 MobiDBLite consensus disorder prediction 282 301 - -
Gma03g01564 979 MobiDBLite consensus disorder prediction 618 642 - -
Gma03g01564 979 Pfam Domain of unknown function (DUF4378) 788 970 IPR025486 -
Gma03g01564 979 MobiDBLite consensus disorder prediction 349 366 - -
Gma03g01564 979 Pfam DUF761-associated sequence motif 110 125 IPR032795 -
Gma03g01564 979 Pfam Protein of unknown function (DUF3741) 216 259 IPR022212 -
Gma03g01564 979 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 978 - -
Gma03g01564 979 MobiDBLite consensus disorder prediction 615 642 - -
Gma03g01564 979 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 978 - -
Gma03g01564 979 MobiDBLite consensus disorder prediction 344 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01564 Gma-Chr3 41925720 41930366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01564 1 976 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 45.100 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01564 - - gmx:100793360 1893.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01564 03 41925720 41930366 Gma03g01564 03 41925720 41930366 ECH
Gma19g01618 19 45615000 45619299 Gma03g01564 03 41925720 41930366 GST
Gma03g01564 03 41925720 41930366 Gma10g00395 10 3794741 3798725 PCT
Gma03g01564 03 41925720 41930366 Gma13g01100 13 25157676 25161326 PCT
Gma10g00395 10 3794741 3798725 Gma03g01564 03 41925720 41930366 PCT
Gma13g01100 13 25157676 25161326 Gma03g01564 03 41925720 41930366 PCT