Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01562 ATGGCTGTGGTTGCCAATCCTGTAGTTGGGTCCCATATTTGGGTGGAGGATCCTGATGTCGCTTGGATAGATAGTGAGGTCTTGGAGGTTAAAGGAGAAGAAATTAAAGTCCTTTGCACTTCAGGGAAGACGGTTGTTGTTAAAGCTTCCAGTATTTATCATAAAGATACAGAAGTCCCACCAAGTGGAGTGGATGATATGACAAAGCTTGCATACCTGCATGAACCTGGAGTCCTAGATAATCTGAGATCAAGATATGATATAAATGAAATTTATACTTACACCGGGAATATATTAATTGCTGTGAACCCTTTCATAAAGCTTCCTCATTTATATGATAGCCATATGATGGCCCAATATAAAGGAGCAGCTTTTGGTGAGCTAAATCCACATCCCTTTGCTGTTGCAGATGCAGCATATAGGCTTATGATAAATGAGGGAATCAGCCAGTCAATATTGGTTAGTGGTGAAAGTGGAGCTGGTAAAACAGAAAGTACCAAGTTGCTCATGAGGTATCTTGCTTACATGGGTGGGAGAGCTGCTGTTGCTGAAGGTAGAACTGTTGAGCAAAAGGTCTTGGAGTCCAATCCTGTTCTAGAAGCCTTTGGCAATGCAAAGACTGTTAGGAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAgattcaatttgaccagagtggaagaatatcaggggctgctatcaggacttatctgcttgaaagatcacgtgtttgccaggtgtcagatccagagaggaactatcattgtttctacatgctctgtgctgcacctccagagGATATTAAAAAGTACAAATTAGGAGATCCAAGAATGTTTCATTATCTGAATCAATCAAATTGCTTTGAGTTGGAAGGGTTTGATGAATCTAAAGAATATAGGGATACAAGGAGAGCAATGGATATTGTTGGAATAAGTTCTGAGGAGCAGgatgcaatatttaaAGTTGTTGCTGCAATTTTGCATCTTGGCAACATTGAATTTGCCAAAGGGAAGGAGATAGACTCATCTGTGCCCAAAGATGAAAAATCTTGGTTCCATCTACAGACTGCTGCTGAGCTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAACGTGTAATTGTTACTCGTGATGAAACAATTACAAAATGGCTGGATCCGGAAGCTGCTGCACTTAGCCGAGATGCCTTGGCTAAGATTGTGTATACAAGATTGTTTGACTGGTTGGTTGATAAAATTAATAATTCTATTGGTCAAGACCCCGAGTCTAAATCCTTAATTGGCGTGCTGGATATTTATGGTTTTGAGAGTTTCAAAACTAACAGTTTTGAGCAATTTTGTATTAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAGGAAATTGATTGGAGTTACATTGAATTTGTGGACAATCAAGATATTCTGGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTCTGGATGAAGCTTGTATGTTTCCTAGATCTACACATGAAACTTTTGCCCAAAAGCTGTATCAGACCTTCAAAAATCACAAAAGGTTTAGCAAGCCTAAATTATCACGTAGTGACTTCACAATTTGCCATTATGCAGGAGATGTCACTTATCAAACTGAATTGTTCCTCGACAAGAACAAGGATTATGTTGTTGCAGAGCACCAGGCCCTTCTTTATGCTTCCAAATGCCCCTTTGTATCAGGCTTGTTTCCCCCTTCTCCCGAAGAATCTTCTAAACAATCAAAGTTCTCTTCAATCGGTTCACGATTTAAGCAACAATTGCAATCTTTACTTGAAACTCTCAGTGCCACTGAGCCACACTACATTCGTTGTGTAAAACCCAATAATCTTCTTAAGCCATCAATTTTTGAGAATAAAAATGTTCTGCTGCAACTACGTTGTGGGGGAGTTATGGAAGCAATTAGGATAAGCTGTGCTGGGTATCCTACTAGAAAAACCTTTGATGAATTTGTGGATCGATTTAGCCTTCTTTCACCTGAAGCATTGACTGGAAGTTCTGATGAGGTCACTGCTTGCAAGAGGATTCTAAAGAATGTTGGACTCGAAGGCTATCAGATTGGTAAGACAAAGGTGTTTCTTCGAGCTGGTCAGATGGCAGAGCTAGATACCCGTAGAAGTGAAATCTTAGGAAGGTCAGCAAGCATTATTCAGAGAAAAGTCCGTTCCTATTTGGCCCGCCAAAGTTTCATCTTGCTTCGTTTGTCTACTGTGCAGATTCAAGCTGCGTGCAGAGGACAACTTGCTCGGCAAGTTTATGAGGGAATGCGGCAGGAGGCTTCTAGTTTGGTGATTCAGAGGTGCTTCCGCATGCATATTGCTCGGAAGGCATACAAAGATTTGTATACCTCTGCTGTTTCTATCCAGACTGGTATGCAGGGGATGGCTGCTCGTTCTGAGCTACACTTTAGAAGGCAGACTAAAGCAGCAATTGCCATTCAGAGCCACTGCCGGAAATACTTGGCAGAACTTCATTTTGCAAAATTGAAGAAGGCAGCAATTGCAACGCAATGTGCATGGAGAGGAAAAGTTGCTCAGCGAGAATTGCGAAAGCTCAAGATGGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTACATTGAGATTGCAGCTGGAAAAACGTTTGAGGGTTGACATTGAAGAAGCAAAAGCACAAGAAAATCAAAGATTACAATCTGCTTTGCAAGAGATGCAACTTCAGTTTAAAGAAACTAAGTTCCTTCTTGAAAAGGAGAAGGAGGCTACAAAAAGAGCAGCAGAGAGAGTGCCTGTCATACAGGAAGTTCCAGTTGTTGACAATGCTTTGTTGGAAAAGCTCAGAAGTGAGAATGAGAAACTCAAGAACATGGTGAGTTCATTGGAAAAGAAAATTGATGAAACGGAAAAAAGGTATGAAGAGGCAAACAAAGTTGGTGAAGAAAGGTTGAAGCAAGCTTTGGATGCAGAATCAAAAGTAATCCAGTTGAAGACTGCTATGCAAAGGCTTGAAGAGAAATTCATAGACATGGAATCTGCAAACCATATTCTTCAGAAACAATCTCTTTTAAACTCATCTGTGAAAACAATAGCAGAGCACTTGTCTTCCCCATTGGATGAGAAGTTAGAAAATGGTCACCATGCAGCAGAAGAGAAGAAAGCTGTTGATACATTTGTTACACCTGTGAAACAATTTGGTACTGAATCAGACAGTAAATTGAGAAGATCTTACATTGAACGACAACATGAGAGTGTTGATTCACTTGTCAATTGTGTTATGAAAAATATTGGCTTCAACCATGGAAAACCCATTGCTGCATTCACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGAACTAGTGTATTTGATCGCCTTATCCAAATGATTGGTTCCGAAATTGAGAATCAAGACGACAATGATCATATGGCCTATTGGCTGTCAAATACATCTGCGTTATTGTTTTTACTTGAACAAAGCCTGAAATCTGGGAGTTCAGCAAATGCTACCCCAGCTAGAAAACCGCCTAATCCGACATCTCTCTTTGGAAGAATGACCATGAGTTTTCTTTCATCACCTTCTTCTGCCAACCTTGCTGCCCCTCCAGCAGATGTTGTACGCAAGGTAGAGGCTAAATACCCTGCTTTGCTTTTCAAGCAACAGCTCACAGCCTATTTTGAGAAAATATATGGCATCATTCGGGATAATTTGAAGAAGGATTTAACACCGATTCTTGCATTATGCATCCAGGCACCAAGAACATCAAAAGGAGGGTTACGTTCTAACCGATCCCTTGCTAAGGATTCCCCAATGGTTCACTGGCAGAGTATTATTGAATCCCTCAATATGCTCCTCTGTACACTGAAAGAGAACTTTGTGCCCCCCGTTCTTATCCAAAAGATCTTTAGTCAAACATTCTCATATATTAACGTGCAACTCTTCAATAGTCTTCTTCTTCGTCGCGATTGTTGCACATTCAGCAATGGGGAATATGTGAAAGCTGGATTAGCTGAATTAGAGCTGTGGTGCTGCCAAGCAAAGGAAGAGTATGCAGGGTCATCTTGGGATGAGCTTAAGCACATAAGACAGGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCCTATGATGAAATCATCAATGATTTGTGCCCTATCTTGAGTGTCCAGCAGCTGTATAGAATATGTACACTTTACTGGGATGCTAACTACAATACTCGAAGTGTATCTCCAGATGTCCTTTCAAGCATGAGGATGCTAATGGCTGAGGACTCCAACAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAGTTCCAGCATCCCCTTCTCAGTGGATGATCTCTCTACATCACTGCAAGAGAAGGATTTCTCTGACATGAAACCAGCAGACGAGCTTCTCGAGAATCCAGCCTTCCAATTCTTAAACGAGTAG 4539 0.3922 MAVVANPVVGSHIWVEDPDVAWIDSEVLEVKGEEIKVLCTSGKTVVVKASSIYHKDTEVPPSGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFIKLPHLYDSHMMAQYKGAAFGELNPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAVAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQSGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDIKKYKLGDPRMFHYLNQSNCFELEGFDESKEYRDTRRAMDIVGISSEEQDAIFKVVAAILHLGNIEFAKGKEIDSSVPKDEKSWFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPEAAALSRDALAKIVYTRLFDWLVDKINNSIGQDPESKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLYASKCPFVSGLFPPSPEESSKQSKFSSIGSRFKQQLQSLLETLSATEPHYIRCVKPNNLLKPSIFENKNVLLQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFSLLSPEALTGSSDEVTACKRILKNVGLEGYQIGKTKVFLRAGQMAELDTRRSEILGRSASIIQRKVRSYLARQSFILLRLSTVQIQAACRGQLARQVYEGMRQEASSLVIQRCFRMHIARKAYKDLYTSAVSIQTGMQGMAARSELHFRRQTKAAIAIQSHCRKYLAELHFAKLKKAAIATQCAWRGKVAQRELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRLRVDIEEAKAQENQRLQSALQEMQLQFKETKFLLEKEKEATKRAAERVPVIQEVPVVDNALLEKLRSENEKLKNMVSSLEKKIDETEKRYEEANKVGEERLKQALDAESKVIQLKTAMQRLEEKFIDMESANHILQKQSLLNSSVKTIAEHLSSPLDEKLENGHHAAEEKKAVDTFVTPVKQFGTESDSKLRRSYIERQHESVDSLVNCVMKNIGFNHGKPIAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSEIENQDDNDHMAYWLSNTSALLFLLEQSLKSGSSANATPARKPPNPTSLFGRMTMSFLSSPSSANLAAPPADVVRKVEAKYPALLFKQQLTAYFEKIYGIIRDNLKKDLTPILALCIQAPRTSKGGLRSNRSLAKDSPMVHWQSIIESLNMLLCTLKENFVPPVLIQKIFSQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSVQQLYRICTLYWDANYNTRSVSPDVLSSMRMLMAEDSNNAQSDSFLLDDSSSIPFSVDDLSTSLQEKDFSDMKPADELLENPAFQFLNE 1512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01562 1512 Pfam Myosin N-terminal SH3-like domain 10 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gma03g01562 1512 PANTHER MYOSIN 6 1510 - -
Gma03g01562 1512 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g01562 1512 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g01562 1512 PRINTS Myosin heavy chain signature 197 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g01562 1512 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g01562 1512 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g01562 1512 CDD MyosinXI_CBD 1108 1481 IPR037975 GO:0007015
Gma03g01562 1512 Gene3D - 440 624 - -
Gma03g01562 1512 Coils Coil 878 937 - -
Gma03g01562 1512 ProSiteProfiles IQ motif profile. 855 884 IPR000048 GO:0005515
Gma03g01562 1512 Gene3D - 253 311 - -
Gma03g01562 1512 ProSiteProfiles IQ motif profile. 832 861 IPR000048 GO:0005515
Gma03g01562 1512 ProSiteProfiles IQ motif profile. 759 788 IPR000048 GO:0005515
Gma03g01562 1512 SMART iq_5 854 876 IPR000048 GO:0005515
Gma03g01562 1512 SMART iq_5 735 757 IPR000048 GO:0005515
Gma03g01562 1512 SMART iq_5 758 780 IPR000048 GO:0005515
Gma03g01562 1512 SMART iq_5 783 805 IPR000048 GO:0005515
Gma03g01562 1512 SMART iq_5 831 853 IPR000048 GO:0005515
Gma03g01562 1512 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gma03g01562 1512 Pfam Myosin head (motor domain) 64 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g01562 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 786 IPR027417 -
Gma03g01562 1512 Gene3D - 667 734 - -
Gma03g01562 1512 ProSiteProfiles IQ motif profile. 784 813 IPR000048 GO:0005515
Gma03g01562 1512 Gene3D - 786 833 - -
Gma03g01562 1512 Gene3D - 736 785 - -
Gma03g01562 1512 Gene3D - 834 883 - -
Gma03g01562 1512 Pfam IQ calmodulin-binding motif 762 779 IPR000048 GO:0005515
Gma03g01562 1512 Pfam IQ calmodulin-binding motif 833 848 IPR000048 GO:0005515
Gma03g01562 1512 Pfam IQ calmodulin-binding motif 738 756 IPR000048 GO:0005515
Gma03g01562 1512 Pfam IQ calmodulin-binding motif 787 805 IPR000048 GO:0005515
Gma03g01562 1512 Pfam IQ calmodulin-binding motif 857 876 IPR000048 GO:0005515
Gma03g01562 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 788 884 IPR027417 -
Gma03g01562 1512 Gene3D Myosin VI head, motor domain, U50 subdomain 313 602 - -
Gma03g01562 1512 SMART DIL_2 1333 1440 IPR002710 -
Gma03g01562 1512 Coils Coil 973 1007 - -
Gma03g01562 1512 Coils Coil 1015 1049 - -
Gma03g01562 1512 CDD MYSc_Myo11 76 721 IPR036018 -
Gma03g01562 1512 SMART MYSc_2a 56 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g01562 1512 Gene3D Kinesin motor domain 65 663 IPR036961 -
Gma03g01562 1512 PANTHER MYOSIN-14 6 1510 - -
Gma03g01562 1512 ProSiteProfiles Myosin motor domain profile. 62 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma03g01562 1512 Pfam DIL domain 1334 1437 IPR002710 -
Gma03g01562 1512 ProSiteProfiles Dilute domain profile. 1157 1458 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01562 Gma-Chr3 41850800 41868076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01562 1 1511 Myosins gene family AT5G43900 75.346 0.0 2360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01562 K10357 - gmx:100795648 2931.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01562 03 41850800 41868076 Gma03g01562 03 41850800 41868076 ECH
Gma19g01616 19 45540208 45554902 Gma03g01562 03 41850800 41868076 GST
Gma03g01562 03 41850800 41868076 Gma10g00392 10 3716854 3734730 PCT
Gma03g01562 03 41850800 41868076 Gma13g01093 13 25058578 25077334 PCT
Gma10g00392 10 3716854 3734730 Gma03g01562 03 41850800 41868076 PCT
Gma13g01093 13 25058578 25077334 Gma03g01562 03 41850800 41868076 PCT