Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01559 ATGACCGCCGGCGGCTGCTCTGCCGGAATTTCGCCACCTGCCGGTCACTCCTTCAAGCCTCTTCTCTCTCCTGACGATGCTCTTCGCCGGTGTCGCGTGCGGCGAGAGAGAATGCCGGTGTCGGTCGTCTTCCTCCTTGCTCTTCTCAACTTGCTTTTCTCCTGCCAAGTGAAGTCGATTTCTTTGAGTGTGTCATTTGCTTCATCAGAACGACCTAAAATGTGGTTTGTTAAACCTTCTTCTGGACCATCTTCTGCACCTGTGCCATCTCCATCTTATCATGGTCCTCATGTAACTCCAAGACCAAGACATCATTATCATCACCGTCACCATCACAGCACGAGACCTTATGTAGCAGCTCCACCACCTTCAAAAGATCAAGCTTGTGACCAAATCTGTACTGATCCGCTCACATCAACTCCCTTTGGTTCACCTTGTGGTTGTGTATTTCCCATGAAAATCAGACTTACACTGGATATAGCTCCTTATGCTGTGTTTCCGGTAATGACTGAGTTAGAGAATGAAATTGCGTTGGGCACTTATTTAGAGCAGAGTCAGGTGAAGATAATGGGTGCCACTGCTGACAGTCAGAATCAGGGAAGAACTATTGTTGATATTAACTTGGTTCCGCTGGGAGAGAAATTTGACAATACAACTGCATCTCTTACATATGAGAGGTTTTGGCACAAGAAAGTCCCTCTAAATAGGAGCCTTTTTGGCGATTATGCTGTTGTGTACATTACTTATCCAGGTAGAATGCCATCATCGCCACCATATGGATCTTTAACTGGGAGCGGTCCTAGTCAAAGTGTTGATGGTATTCTGCCAGTCAGTGCCAACTTTGTCAGCAAGAACCAGAAAATGAATCTCAGGACCATAATCATCATTGCTTTATCTTCCTTTGTACTCTTGCTGGTTTTGGTGGGAGCATTTTCGATTATTTTGAAATGGAGGAAGACTAGGAGACCATCAAGTGCTGTTGGCCCTGCGTTCACATCATCTCTAAACAAGAGATCAGGCTTGGGGTCTATGTTGTCAAGTAGTATTACAAGCTCAACATCAATGTCACTTATGTCCACAATGGCTACTTCCCTGCTCTCTGTTAAaacattttcactttctgagcttgagaaagcaacagataagtttagttcaaagagagtactaggtgaaggaggatttggacgtgtttatagTGGGACATTGGAAGATGGGGCTGAAGTTGCAGTTAAGCTGCTAACAAGAGATAATCATCAGAATGGAGACCGTGAATTTATTGCAGAGGTTGAAATGCTAAGCCGTTTGCATCACCGTAACCTAGTGAAACTGATTGGTATATGCATTGAAGGGCGCAGGCGTTGCTTGGTGTATGAGCTTGTTCGCAATGGCAGTGTTGAGTCCCATCTGCATGGTGATGACAAGATAAagggaatgctagattgggaagcaaggatgaaaattgcactaggagctgcaagaggattggcctatcttcacgaggattccaatccccgagttattcacagagactttaaagctagcaatgtgttactagaagatgactttactcccaaagtttctgattttggcttggcaagagaagcaactgaaggaagtaatcatatttcaacacgggtgatgggcacttttgggtatgttgccccagaatatgcgatgacaggccatttacttgtcaaaagtgatgtttatagttatggtgttgtgctgcttgaacttctcacaggcagaaagccagtggaTATGTCTCAACCTCAGGGACAGGAGAATCTTGTAACTTGGGCACGGCCAATGTTGACGAGTAGAGAAGGTGTAGAACAGTTGGTGGATCCATCTTTGGCTGGAAGTTACAACTTTGATGACATGGCAAAGGTTGCTGCTATCGCTTCAATGTGCGTTCACCCGGAGGTTACACAGAGACCATTTATGGGTGAAGTTGTGCAGGCTCTCAAGTTAATATACAATGATACAGATGAAACTTGTGGAGATTATTGTAGTCAGAAGGATTCCTCTGCTCAGGAGTCTGATTTTAGAGGTGACCTTGCCCCTTCAGATAGCAGTTGGTGGAATGCGGGAGGGCTAACCCCTCGATTAACTTATGGGCAAGCATCTTCCTTCATCACTATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAGAACAGACCGTTTTCAACTTCAAGCTTGATTGGCGATGAAATATCTTTACCGGTTAAGCATGGGAATAGATCAGGTCCCTTAAGAACAGTCCGAAACAAGCTGTCCTTGCATAGATTTACAGGAAGTCGGAGTGAGCATGGAGGACCTTCTTCCAAGCGTAATTGGAATGATGGCAACTGGGTTTAA 2364 0.3714 MTAGGCSAGISPPAGHSFKPLLSPDDALRRCRVRRERMPVSVVFLLALLNLLFSCQVKSISLSVSFASSERPKMWFVKPSSGPSSAPVPSPSYHGPHVTPRPRHHYHHRHHHSTRPYVAAPPPSKDQACDQICTDPLTSTPFGSPCGCVFPMKIRLTLDIAPYAVFPVMTELENEIALGTYLEQSQVKIMGATADSQNQGRTIVDINLVPLGEKFDNTTASLTYERFWHKKVPLNRSLFGDYAVVYITYPGRMPSSPPYGSLTGSGPSQSVDGILPVSANFVSKNQKMNLRTIIIIALSSFVLLLVLVGAFSIILKWRKTRRPSSAVGPAFTSSLNKRSGLGSMLSSSITSSTSMSLMSTMATSLLSVKTFSLSELEKATDKFSSKRVLGEGGFGRVYSGTLEDGAEVAVKLLTRDNHQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVRNGSVESHLHGDDKIKGMLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSNHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARPMLTSREGVEQLVDPSLAGSYNFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCGDYCSQKDSSAQESDFRGDLAPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLIGDEISLPVKHGNRSGPLRTVRNKLSLHRFTGSRSEHGGPSSKRNWNDGNWV 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01559 787 MobiDBLite consensus disorder prediction 765 787 - -
Gma03g01559 787 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 42 784 - -
Gma03g01559 787 Gene3D Transferase(Phosphotransferase) domain 1 460 681 - -
Gma03g01559 787 PANTHER OS01G0750732 PROTEIN 42 784 - -
Gma03g01559 787 ProSitePatterns Protein kinases ATP-binding region signature. 389 411 IPR017441 GO:0005524
Gma03g01559 787 CDD STKc_IRAK 389 659 - -
Gma03g01559 787 ProSiteProfiles Protein kinase domain profile. 383 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01559 787 MobiDBLite consensus disorder prediction 770 787 - -
Gma03g01559 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Gma03g01559 787 SUPERFAMILY Protein kinase-like (PK-like) 361 659 IPR011009 -
Gma03g01559 787 Gene3D Phosphorylase Kinase; domain 1 354 459 - -
Gma03g01559 787 MobiDBLite consensus disorder prediction 98 115 - -
Gma03g01559 787 Pfam Protein tyrosine and serine/threonine kinase 385 656 IPR001245 GO:0004672|GO:0006468
Gma03g01559 787 MobiDBLite consensus disorder prediction 79 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01559 Gma-Chr3 41822798 41828729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01559 132 776 Receptor kinase-like Gene Family AT5G56890 53.662 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gma03g01559 PK_Tyr_Ser-Thr 7.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01559 - - gmx:100792309 1479.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01559 03 41822798 41828729 Gma03g01559 03 41822798 41828729 ECH
Gma19g01614 19 45523381 45529831 Gma03g01559 03 41822798 41828729 GST
Gma03g01559 03 41822798 41828729 Gma10g00388 10 3661049 3667882 PCT
Gma03g01559 03 41822798 41828729 Gma13g01089 13 25010724 25018128 PCT
Gma10g00388 10 3661049 3667882 Gma03g01559 03 41822798 41828729 PCT
Gma13g01089 13 25010724 25018128 Gma03g01559 03 41822798 41828729 PCT