Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01546 ATGGCCGTCGATGAAATTGAAATCTTGTCTCCTACGTTTTCTTCTTCGGGATCGTTTGAGACCCTTTGGAGTGCGATCCTCGGATTGCCTTTGTTGGAACTGGTGGCAATTTGTGCCAACTTGACACTGTCTCTTCTCTTTCTCTTCGTTGTTTCGGCGAGGAAGGTGCTTGTGTGTGTAGGGAGAGGAGTAAGATTTGGTAAGGAGAACATAACCGGCAATGCCAGCCCCGGTTGTGTTAGTGTTGATTTGGAAACACGTGACGTCGTTCGGATTGAAACGTGGTTCAAGTTGTCGGTGTTGTCTTGTTTGTATGTTCTGTTGGTGCAAGTTTTGCTCTTGGGGTTTGATGGGGTTGCTTTGATTAGAGGAAGGGATTTGGATGTGGATTTGGATTTGGGTTTGGCTCTTCTTTCTGTGCCTCTTGTGCAGGGTTTAGCTTGGGTTGTGTTGAGCTTCTCGGCTTTGCAATGCAAGTTCAAGGCGTCTGAGAGGTTTCCAATTTTGCTCAGACTTTGGTGGGTTATGCTGTTTGGTATTTGTTTGTGTGGTTTGTATGTTGATGGTAAGGGGGTTTGGATGGAGGGTTCCAAGCACCTGCGGTCTCATGTTGTGGCGAATTTCACCATCACTCCTGCTCTTGCCTTTTTGTGTATTGTGGCAATTAGGGGTGTTACTGGTATAAAGGTTTTTAGGAATTCCGAGGAGCACCAGCCATTGCTTGTTGAGGAGGAACCGGGGTGTCTCAAGGTTACTCCTTATACTGATGCCGGACTTTTTAGCTTGGCCACTTTGTCTTGGTTGAATCCACTTCTTTCCATAGGGGCAAAAAGGCCGCTTGAGCTTAAGGACATTCCCCTTGTTGCGGCGAAAGACCGATCCAAGACAAATTATAAGGTTTTGAATTCTAATTGGGAGAGGTTGAAGGCTGAAAACCAATCCGAGCAGCCTTCCTTGGCTTGGGCACTTCTCAAGTCCTTCTGGAAGGAGGCAGCTTGTAATGCCGTATTTGCTGGTGTCACTactcttgtctcgtatgtcggtccgtacatgataagttactttgttgattacttggttggcaaagagattttcccacatgaggggtatgtccttgcaggggtattctttgtggcaaagcttgtggagacctttactactaggcagtggtatcttggggtggacatcttgggtatgcatgttaggtcggctctaactgcaatggtatatcgaaaggggctaaggatatcaagcttggccaagcaaagtcacacgagtggggaggttgttaactacatggctattgatgttcagagggtaggggactactcttggtatcttcatgacatgtggatgcttcctctgcagattgttcttgcccttgcaattttgtataagaatgttggaattgctgctattgcaacactgattgctacaataatttccatcgtcgtcactgttcctattgccagggtccaagaaaattatcaagacaaattaatggctgctaaggatgaaaggatgagaaaaacatctgagtgcctgaggaatatgaggattctcaaacttcaagcttgggaggacagatatagagtgaaattggaggaaatgcgtggagtagagttcaagtggcttcggaaagccctctattctcaggctttcataactttcatattctggagctcccctatatttgtttcggcggtcacttttgctacttccatattgttgggtggtcagctgactgctggtggtgtactttctgctctggctactttcaggatcctgcaagaacctttgaggaattttccggacttggtgtcaacaatggctcagacaaaggtttctcttgaccgattatctggtttcctgctggaggaggaattgcaggaagatgcaactattgtcttgccacaaggcattactaacattgctatagaaattaaggatggtatcttctgttgggacccttcttcatcttttaggcctaccctatcagggataagtatgaaagttgaaagaaggatgcgcgtggctgtttgtggtatggttggttcagggaaatcgagttttctttcgtgcatccttggagagattccTAAACTTTCTGGTGAAGTTAGAGTGTGTGGCTCTTCTgcttatgtctcccaatcagcgtggatacaatcaggaactatagaagaaaatatcctctttggaagcccaatggacaaagcaaagtacaagaatgttcttcatgcttgttcactgaaaaaggacctagaacttttctcacatgatgatcagacaattattggggatagaggtataaacctgagtggtggccagaagcagcgggttcagcttgcacgagcactctaccaagatgctgatatttatcttctggatgatcccttcagtgcagttgatgctcacactggatcagacttgtttaggGAGTATATATTGACAGCACTTGCAGATAAAACAGTCATTTTTGTGACCCATCAAGTTGAATTTCTTCCCGCTGCTGATTTGATTCTGGTTCTTAAAGAAGGATGCATCATACAGTCAGGAAAGTATGATGATCTTTTACAAGCAGGAACAGATTTTAATACTCTGGTTTCAGCTCACCATGAAGCCATAGAGGCTATGGATATCCCTACTCACTCCTCTGAAGAGTCAGATGAAAATTTATCCCTGGAGGCATCTGTTATGACCAGTAAGAAATCCATTTGTTCAGCAAATGATATAGACAGTTTAGCAAAGGAAGTGCAAGAGGGATCATCTATTTCAGATCAAAAAGCAATTAAAGAGAAGAAGAAGAAAGCAAAACGATCGAGAAAGAAAcagcttgttcaggaagaggagaggattagaggtagagtcagcatgaaggtgtatctttcatacatggcagcagcatataaaggcttattgattccactcataatcattgcacaaacattatttcagttccttcagattgcaagcaattggtggatggcttgggctaaccctcaaacagaaggagacctgcccaaagtaactccctcagttcttcttcttgtttatatggcccttgcttttggcagctcatggtttatatttgtaagggctgttctggtggctacatttggtcttgcagctgcccagaagctatttttgaaaatgcttagaagtgttttccatgcaccaatgtctttctttgactctacaccagctggaaggatcttgaatcgggtatcaattgatcaaagtgttgtggatcttgacattccttttagacttggtggatttgcttcaactacaatacagcttattggtattgttggtgtaatgacagaagttacatggcaagttttGCTCTTAGTTGTCCCAATGGCTGTTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTGGTTCGTATTGTTAGCATACAGAAGTCTCCAATTATACATCTTTTTGGTGAATCAATTGCTGGAGCATCCACCATCAGGGGTTTTGGACAAGAAAAAAGGTTCATGAAGCGGAACCTCTATCTTCTTGATTGCTTTGCACGACCATTCTTCTGCAGTCTTTCTGCAATTGAGTGGCTCTGCCTGCGGATGGAGTTACTGTCAACCTTTGTATTTGCTTTCTGTATGGTATTACTTGTGAGTTTTCCTCGTGGAAGTATCGACCCCAgcatggctggacttgctgtgacatatggcctgaatttaaatgcacgcctatcacggtggatactcagcttttgcaagcttgaaaataaaattatatctattgagagaatttatcagtacagtcaaattcctagtgaagcacccacaattattgaagattctcgccctccattctcatggccagaaaatgggacaattgaaataattgatttgaaggtccgttacaaggagaatcttcctatggtgcttcatggagtaacatgcacatttccaggtggaaagaagattggaatagttggacgtactggcagtggaaaatctactttaattcaggcgttatttcgattgattgaaccagcaagtgggagtatccttatagacaacattaatatttcagagattggccttcatgaccttcgaagccatctcagtatcatacctcaagatccaaccttatttgaaggtaccattcgaggcaatcttgatcctctggatgagcactcagataaagagatttgggagGCACTTGATAAGTCTCAGCTTGGAGAGGTTATCCGTGAGAAAGGACAACAGCTTGACACACCAGttctagaaaatggagataattggagtgtaggacagcgacaacttgttgctctgggccgagctctgctgcagcagtcaagaatacttgtactggatgaagcaacagcatcagttgatactgccacggataatcttatccagaagattatccgaagtgagttcaaagactgcactgtttgcaccattgcacatcgaatacctactgtcattgacagtgatctagttcttgtgctcagtgatgGTCTAGTCGCAGAGTTCGACACTCCTTCAAGACTATTAGAGGATAAGTCATCCGTGTTTCTGAAGTTGGTGACCGAGTATTCATCTCGTTCAAGTGGCATACCAGACTTTTAG 4620 0.1885 MAVDEIEILSPTFSSSGSFETLWSAILGLPLLELVAICANLTLSLLFLFVVSARKVLVCVGRGVRFGKENITGNASPGCVSVDLETRDVVRIETWFKLSVLSCLYVLLVQVLLLGFDGVALIRGRDLDVDLDLGLALLSVPLVQGLAWVVLSFSALQCKFKASERFPILLRLWWVMLFGICLCGLYVDGKGVWMEGSKHLRSHVVANFTITPALAFLCIVAIRGVTGIKVFRNSEEHQPLLVEEEPGCLKVTPYTDAGLFSLATLSWLNPLLSIGAKRPLELKDIPLVAAKDRSKTNYKVLNSNWERLKAENQSEQPSLAWALLKSFWKEAACNAVFAGVTTLVSYVGPYMISYFVDYLVGKEIFPHEGYVLAGVFFVAKLVETFTTRQWYLGVDILGMHVRSALTAMVYRKGLRISSLAKQSHTSGEVVNYMAIDVQRVGDYSWYLHDMWMLPLQIVLALAILYKNVGIAAIATLIATIISIVVTVPIARVQENYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRVKLEEMRGVEFKWLRKALYSQAFITFIFWSSPIFVSAVTFATSILLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRLSGFLLEEELQEDATIVLPQGITNIAIEIKDGIFCWDPSSSFRPTLSGISMKVERRMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGSSAYVSQSAWIQSGTIEENILFGSPMDKAKYKNVLHACSLKKDLELFSHDDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSDLFREYILTALADKTVIFVTHQVEFLPAADLILVLKEGCIIQSGKYDDLLQAGTDFNTLVSAHHEAIEAMDIPTHSSEESDENLSLEASVMTSKKSICSANDIDSLAKEVQEGSSISDQKAIKEKKKKAKRSRKKQLVQEEERIRGRVSMKVYLSYMAAAYKGLLIPLIIIAQTLFQFLQIASNWWMAWANPQTEGDLPKVTPSVLLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFLKMLRSVFHAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLIGIVGVMTEVTWQVLLLVVPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLSAIEWLCLRMELLSTFVFAFCMVLLVSFPRGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPTIIEDSRPPFSWPENGTIEIIDLKVRYKENLPMVLHGVTCTFPGGKKIGIVGRTGSGKSTLIQALFRLIEPASGSILIDNINISEIGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLDEHSDKEIWEALDKSQLGEVIREKGQQLDTPVLENGDNWSVGQRQLVALGRALLQQSRILVLDEATASVDTATDNLIQKIIRSEFKDCTVCTIAHRIPTVIDSDLVLVLSDGLVAEFDTPSRLLEDKSSVFLKLVTEYSSRSSGIPDF 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01546 1539 CDD ABC_6TM_ABCC_D1 333 620 IPR044746 GO:0140359
Gma03g01546 1539 CDD ABCC_MRP_domain1 646 846 - -
Gma03g01546 1539 Gene3D ABC transporter type 1, transmembrane domain 303 627 IPR036640 GO:0005524|GO:0016021
Gma03g01546 1539 Gene3D ABC transporter type 1, transmembrane domain 935 1274 IPR036640 GO:0005524|GO:0016021
Gma03g01546 1539 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 83 1539 - -
Gma03g01546 1539 Gene3D - 1276 1529 IPR027417 -
Gma03g01546 1539 SUPERFAMILY ABC transporter transmembrane region 321 626 IPR036640 GO:0005524|GO:0016021
Gma03g01546 1539 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 976 1246 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma03g01546 1539 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1293 1527 IPR003439 GO:0005524
Gma03g01546 1539 CDD ABC_6TM_ABCC_D2 974 1268 IPR044726 GO:0140359
Gma03g01546 1539 Pfam ABC transporter 665 799 IPR003439 GO:0005524
Gma03g01546 1539 ProSitePatterns ABC transporters family signature. 772 786 IPR017871 GO:0005524
Gma03g01546 1539 Gene3D - 628 892 IPR027417 -
Gma03g01546 1539 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 83 1539 - -
Gma03g01546 1539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1283 1523 IPR027417 -
Gma03g01546 1539 Coils Coil 493 513 - -
Gma03g01546 1539 Pfam ABC transporter 1310 1458 IPR003439 GO:0005524
Gma03g01546 1539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 642 869 IPR027417 -
Gma03g01546 1539 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 646 870 IPR003439 GO:0005524
Gma03g01546 1539 CDD ABCC_MRP_domain2 1291 1511 - -
Gma03g01546 1539 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 335 612 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma03g01546 1539 SUPERFAMILY ABC transporter transmembrane region 973 1273 IPR036640 GO:0005524|GO:0016021
Gma03g01546 1539 Pfam ABC transporter transmembrane region 336 600 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma03g01546 1539 Pfam ABC transporter transmembrane region 976 1218 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma03g01546 1539 SMART AAA_5 674 855 IPR003593 -
Gma03g01546 1539 SMART AAA_5 1319 1504 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01546 Gma-Chr3 41679371 41686543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01546 646 863 Calmodulin-binding Proteins AT2G36910 30.342 2.48e-18 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01546 - - gmx:100790550 2917.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01546 03 41679371 41686543 Gma03g01546 03 41679371 41686543 ECH
Gma19g01600 19 45359706 45367177 Gma03g01546 03 41679371 41686543 GST
Gma03g01546 03 41679371 41686543 Gma13g01082 13 24948513 24957495 PCT
Gma13g01082 13 24948513 24957495 Gma03g01546 03 41679371 41686543 PCT