Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01543 ATGGAATCCAAATCCAAAATTCAACTCTTTTTCCTCACCCTTTTCCTCTTCACTCTCACCCTCCATGCAGAAACTCTTGGAACTTACATAGTTCAGCTACACCCTCATGGCATAACCAGCACTTCCTTCTCCTCAAAGCTCAAATGGCACCTTTCATTCATCCAACAAACCATTTCCTCTGATGAGGACCCTTCTTCGCGCCTTCTCTACTCGTACCGTTCTGCCATGGACGGTTTTGCAGCTCAGTTAACTGAGACTGAGCTTGAGTACCTCAAAAACTTGCCAGATGTTATCTCAATCTGGCCAGACAGCAAGCTCCAGATTCAGACCACTTACTCTTACAAGTTCTTGGGGCTGAATCCTGCTAGAGAAAATGGTTGGTACCAATCCGGGTTCGGCCGCGGAACCATAATTGGTGTGCTTGACACTGGAGTGTGGCCAGAGAGTCCTAGCTTCAATGATCAAGGAATGCCCCCAATTCCCCAAAAATGGAAGGGTATATGCCAAGCTGGGAAGGCCTTTAACTCTACCAATTGTAACCGAAAACTCATCGGTGCAAGGTACTTCACAAAAGGCCATTTTTCAGTGTCACCTTTCAGAGATCCTGAGTATCTCTCTCCGAGAGACTCCTCAGGACACGGCACGCACACCGCATCCACCGCGGGAGGCGTGCCTGTTCCGCTGGCGAGCGTGTTCGGTTATGCGTCCGGCGTGGCGAGAGGAATGGCTCCTGGTGCCCACATTGCGGTGTACAAAGTGTGTTGGTTCAATGGCTGCTATAACTCAGACATCATGGCTGCAATGGATGTGGCAATCAGGGATGGTGTGGACATTCTGTCCTTGTCTCTTGGTGGCTACTCTTTGCCTCTATATGATGATAGCATTGCCATTGGAAGCTATAGAGCAATGGAGCATGGGATTTCAGTTATATGTGCAGCAGGAAACAATGGCCCTACGGAAATGTCTGTTGCCAATGAAGCTCCTTGGATTTCCACAATTGGTGCAAGCACACTAGACAGGAAATTCCCAGCAACAGTTCACATAGGAAATGGACAAATGCTCTATGGAGAATCCATGTATCCACTGAATCATCATCCAATGAGCAACGGCAAAGAAATTGAGCTGGTTTATTTGTCTGAAGGGGACACCGAGAGCCAATTTTGCCTCAGAGGGTCTCTTCCAAAGGACAAAGTTAGAGGCAAAATGGTGGTCTGCGATCGAGGCATCAACGGAAGAGCAGAAAAGGGACAAGTGGTGAAGGAGGCGGGTGGTGTCGCTATGATCCTCACAAACACGGAGATAAACTTGGGAGAGGATTCAGTTGATGTTCATGTCTTGCCTGCAACTTTGGTAGGATTTGATGAAGCAGTCACCCTGAAGGCTTACATAAACTCCACAAAAAGGCCTCTTGCAAGGATCGAATTCGGAGGAACTGTGATAGGGAAGTCTAGAGCTCCATCAGTGGCAAGATTTTCTGCTAGAGGACCAAGCTATACAAACCCTTCAATCCTAAAACCTGATGTTATAGCTCCAGGAGTGAACATCATTGCAGCATGGCCTCAGAACCTCGGTCCTACCGGCCTTCCGGAGGATACTAGAAGAGTTAACTTCTCTGTGATGTCCGGTACCTCAATGGCATGCCCTCATGTCAGTGGAATTGCTGCTCTCATTCGCTCGGTTCACCCGAGATGGAGCCCTGCAGCCATCAAATCTGCAATCATGACAACGGCCGAGGTGACTGACCACACCGGAAGGCCAATACTCGATGAAGATCAACCAGCGGGAGTTTTCGACATGGGAGCCGGACATGTGAATCCACAAAGAGCATTGAACCCTGGATTGGTGTATGACATTAGGCCAGATGACTACATCACCCATCTTTGCAGCCTTGGATACACAAAGTCAGAAATATTCAGCATCACACATAGAAATGTGAGTTGCAATGCAATCATGAAGATGAATAGAGGCTTCAGCCTTAACTATCCCTCATTCTCAGTAATTTTTAAGGGTGGGGTGAGGAGAAAGATGTTCAGCAGGAGACTAACAAATGTGGGAAGTGCTAACTCCATCTACTCAATGGAGGTTAAGGCACCTGAAGGAGTAAAAGTGATAGTGAAACCAAAGAGGTTGGTATTTAAGCAAGTGAATCAAAGCTTGAGTTATAGGGTGTGGTTTATATCAAGAAAAAGGGTTAAAAGAGGTGATGATTTGGTGAACTATGCAGAAGGGAGTTTGACATGGGTGCACTCACAAAATGGTTCCTACAGGGTTAGAAGCCCGGTAGCAGTGACTTGGAAGTCAAAGTAG 2307 0.4725 MESKSKIQLFFLTLFLFTLTLHAETLGTYIVQLHPHGITSTSFSSKLKWHLSFIQQTISSDEDPSSRLLYSYRSAMDGFAAQLTETELEYLKNLPDVISIWPDSKLQIQTTYSYKFLGLNPARENGWYQSGFGRGTIIGVLDTGVWPESPSFNDQGMPPIPQKWKGICQAGKAFNSTNCNRKLIGARYFTKGHFSVSPFRDPEYLSPRDSSGHGTHTASTAGGVPVPLASVFGYASGVARGMAPGAHIAVYKVCWFNGCYNSDIMAAMDVAIRDGVDILSLSLGGYSLPLYDDSIAIGSYRAMEHGISVICAAGNNGPTEMSVANEAPWISTIGASTLDRKFPATVHIGNGQMLYGESMYPLNHHPMSNGKEIELVYLSEGDTESQFCLRGSLPKDKVRGKMVVCDRGINGRAEKGQVVKEAGGVAMILTNTEINLGEDSVDVHVLPATLVGFDEAVTLKAYINSTKRPLARIEFGGTVIGKSRAPSVARFSARGPSYTNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDTRRVNFSVMSGTSMACPHVSGIAALIRSVHPRWSPAAIKSAIMTTAEVTDHTGRPILDEDQPAGVFDMGAGHVNPQRALNPGLVYDIRPDDYITHLCSLGYTKSEIFSITHRNVSCNAIMKMNRGFSLNYPSFSVIFKGGVRRKMFSRRLTNVGSANSIYSMEVKAPEGVKVIVKPKRLVFKQVNQSLSYRVWFISRKRVKRGDDLVNYAEGSLTWVHSQNGSYRVRSPVAVTWKSK 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01543 768 CDD PA_subtilisin_like 345 473 - -
Gma03g01543 768 Pfam Fibronectin type-III domain 659 763 IPR041469 -
Gma03g01543 768 Pfam PA domain 384 457 IPR003137 -
Gma03g01543 768 SUPERFAMILY PA domain 350 437 IPR046450 -
Gma03g01543 768 Gene3D Peptidase S8/S53 domain 135 623 IPR036852 GO:0004252|GO:0006508
Gma03g01543 768 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Gma03g01543 768 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Gma03g01543 768 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Gma03g01543 768 Pfam Peptidase inhibitor I9 28 108 IPR010259 -
Gma03g01543 768 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.2 23 765 - -
Gma03g01543 768 ProSiteProfiles Serine proteases, subtilase domain profile. 111 610 - -
Gma03g01543 768 CDD Peptidases_S8_3 106 577 IPR034197 -
Gma03g01543 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 109 IPR037045 -
Gma03g01543 768 Gene3D - 627 765 - -
Gma03g01543 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 765 IPR045051 -
Gma03g01543 768 Pfam Subtilase family 133 589 IPR000209 GO:0006508|GO:0008236
Gma03g01543 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Gma03g01543 768 Gene3D - 339 480 - -
Gma03g01543 768 SUPERFAMILY Subtilisin-like 109 614 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01543 Gma-Chr3 41666881 41669187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01543 9 767 Subtilisin-like Serine Gene Family AT1G04110 66.537 0.0 1075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01543 03 41666881 41669187 Gma03g01543 03 41666881 41669187 ECH
Gma19g01598 19 45352945 45355201 Gma03g01543 03 41666881 41669187 GST
Gma03g01543 03 41666881 41669187 Gma10g00382 10 3612289 3614037 PCT
Gma03g01543 03 41666881 41669187 Gma13g01080 13 24936074 24937831 PCT
Gma10g00382 10 3612289 3614037 Gma03g01543 03 41666881 41669187 PCT
Gma13g01080 13 24936074 24937831 Gma03g01543 03 41666881 41669187 PCT