Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma03g01541 | ATGTCTAAAGATGACAACTCTTCTTCACTGGATTCTTCTTCTTCTGACCTTCAATTGTCTCTCTCTTTAACACTCTCTCCCTATGCCACCACTTCTTCTCCTTCATCTATTTCTCATTCCTGTTCTGCTGCTCTTGCCACCGCTGCCAGTCAAGTTGTTGGATGGCCTCCCCTTGGAGCATATAGAATGAATATCTATAATAGCCAGGCAAAATCACCAGCCACAGAAGTATTCAATTCTACAGTTGACAACAAAAGAGCAAGCAATAGTACTGGGGTTAGGAAGACTGCAGATGGTGGCAGTGATAGTAGCAACATTATTTTCAAAGAAAAAGGAAACCTCAGGAGTTCCCTGTTTGTGAAAGTAAAAATGGATGGGATACCAATTGGAAGGAAGGTTGATTTAGGTGCTCATGGTTCCTATGAAACCTTAGCTCAAACCTTGGAGGATATGTTTGATGAATCAGCTACAGTCCTCACTCACAAAGTAGGATCAAATGGAGAAGATCACGGTACTGAAGTTGGAGCAGATGGGCATTCAAAATTGCTGCATGGTTCTTCTGACCTTgtgctcacttatgaagacaaggaaggagactggatgcttgtgggagatgttccttggtggatgttccttaactctgtgaggaggctaagaatcatgagGACACCTGAAGCTAATGGACTTGCCCCAAGATTGAAGGAAAAGAACAGAAGATCGAAATGCAAGCTCATATAG | 738 | 0.3659 | MSKDDNSSSLDSSSSDLQLSLSLTLSPYATTSSPSSISHSCSAALATAASQVVGWPPLGAYRMNIYNSQAKSPATEVFNSTVDNKRASNSTGVRKTADGGSDSSNIIFKEKGNLRSSLFVKVKMDGIPIGRKVDLGAHGSYETLAQTLEDMFDESATVLTHKVGSNGEDHGTEVGADGHSKLLHGSSDLVLTYEDKEGDWMLVGDVPWWMFLNSVRRLRIMRTPEANGLAPRLKEKNRRSKCKLI | 245 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma03g01541 | 245 | SUPERFAMILY | CAD & PB1 domains | 113 | 221 | - | - | |
Gma03g01541 | 245 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 9 | 236 | IPR003311 | GO:0005634|GO:0006355 | |
Gma03g01541 | 245 | Gene3D | - | 112 | 235 | - | - | |
Gma03g01541 | 245 | Pfam | AUX/IAA family | 39 | 232 | IPR033389 | - | |
Gma03g01541 | 245 | ProSiteProfiles | PB1 domain profile. | 117 | 225 | IPR000270 | GO:0005515 | |
Gma03g01541 | 245 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA11 | 9 | 236 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma03g01541 | Gma-Chr3 | 41650959 | 41655331 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma03g01541 | 121 | 231 | B3 DNA Binding Superfamily | AT4G23980 | 33.333 | 2.63e-11 | 61.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | AUX/IAA | Gma03g01541 | AUX_IAA | 4.7e-57 | CL0072 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma03g01541 | 03 | 41650959 | 41655331 | Gma03g01541 | 03 | 41650959 | 41655331 | ECH | |
Gma19g01595 | 19 | 45323876 | 45328285 | Gma03g01541 | 03 | 41650959 | 41655331 | GST | |
Gma03g01541 | 03 | 41650959 | 41655331 | Gma10g00379 | 10 | 3596128 | 3599997 | PCT | |
Gma03g01541 | 03 | 41650959 | 41655331 | Gma13g01077 | 13 | 24915698 | 24919758 | PCT | |
Gma10g00379 | 10 | 3596128 | 3599997 | Gma03g01541 | 03 | 41650959 | 41655331 | PCT | |
Gma13g01077 | 13 | 24915698 | 24919758 | Gma03g01541 | 03 | 41650959 | 41655331 | PCT |