Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01530 ATGGAAGCACATTCTGCTTTCTCTATTGAAAGGTCAAATGCTAATGACATGGGGATGTCTGAAGTATTTCCTTCATCGTTGCCTGTCCTTCCATCGCCTCTAGAAGAGACATTCCCCAAATTATCTGATTCTCGACCAGCTTTTATGGAAAAAGAACTTAAAACAAAACCTTTTACACATTCAAGTCATTTAACTTCCAGCGGAGCAGTTGGGCATATGTTTTCATCTTCTCCTGGATATTCAACTGATCTTCATCACTCATCCTTTTCATCTTATGAAAAACAACCTAGAAATACTCATTTTATTTCACAACCATTGGGTAACATGGCTTCATTGCCATTATCTTATTCTTCAAATAGTGAACCAATACCTTCTACAACGTCAACCCCTTATTCCAATGGAAACAGTGTTTCCTGGCATACAGATTCTCTGCCTAGCTTTCTTGATTTCACAGCCAATACCTCCATTGATAATAGTCAAGTAGAAAACCGTGCCTGCAATATCATGGCAACTGAAGAGTATTCTAAGCGAAATGATTGGCAGGAGTGGGCTGACCAATTAATCAGTGATGTTGATCCTTTGACTTCTAACTGGAATGATCTTCTTGCTGACAACATTCAAGATCTGGAACCAAAGGTCACAAAATCATCTTCACAACTTCCAATAGAACACCAATCTCAAAGCCATCAACAACTTTGTGCTTCATCTGGAGAAAATCGTGTTGGTGTTGCCCCAACTTCCTCAGCAAATTCTGCACCTGCCAAGCCACGGATGCGCTGGACACCTGAGCTTCATGAGGCATTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACCCCTAAAGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATACCATGTTAAAAGCCACCTACAGAAATACAGGACAGCTAGATATAGACCTGAGTCATCTGAAGGAGCTGCAGAGAAAAATCTAAGTCGAATCGAAGAGATGTCATCTCTAGATTTGAAAACTGGTATTGAGATCACTGAAGCTCTGAGGTTGCAGATGGAGGTTCAGAAGCGGTTGCATGAACAGCTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAACAAGGAAGGTACCTTCAGATGATGTTTGAGAAGCAGTGCAAACCTGGCATTGAAACATTTAAGGCATCATCATCTGTCATCGAGAGTCAATCTGGAGTGTCTTCTGATGCCATCAAAGATTCTCCAGCCAAAACTGAATCAGAAACCATCAAGGTGGACCACTGCAAGTCAGGAGCTGATCTGGCTAATGGCAGTACCACAGTTGAGGAAAGCTCATTGGAAGTGGCTGAGAAGCAGGATGCTCCTGAAATTCAAGCTTCCGACAATCCTGAGCAACATGCTAGTGAAGATAGTGGTAATGCTTCAAAGCGTCCACGGACAGAGGAGTAA 1446 0.4212 MEAHSAFSIERSNANDMGMSEVFPSSLPVLPSPLEETFPKLSDSRPAFMEKELKTKPFTHSSHLTSSGAVGHMFSSSPGYSTDLHHSSFSSYEKQPRNTHFISQPLGNMASLPLSYSSNSEPIPSTTSTPYSNGNSVSWHTDSLPSFLDFTANTSIDNSQVENRACNIMATEEYSKRNDWQEWADQLISDVDPLTSNWNDLLADNIQDLEPKVTKSSSQLPIEHQSQSHQQLCASSGENRVGVAPTSSANSAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGAAEKNLSRIEEMSSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPGIETFKASSSVIESQSGVSSDAIKDSPAKTESETIKVDHCKSGADLANGSTTVEESSLEVAEKQDAPEIQASDNPEQHASEDSGNASKRPRTEE 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01530 481 Coils Coil 343 363 - -
Gma03g01530 481 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 252 312 IPR017930 -
Gma03g01530 481 SUPERFAMILY Homeodomain-like 253 309 IPR009057 -
Gma03g01530 481 MobiDBLite consensus disorder prediction 397 481 - -
Gma03g01530 481 MobiDBLite consensus disorder prediction 413 427 - -
Gma03g01530 481 MobiDBLite consensus disorder prediction 397 412 - -
Gma03g01530 481 Pfam Myb-like DNA-binding domain 257 308 IPR001005 -
Gma03g01530 481 Pfam MYB-CC type transfactor, LHEQLE motif 340 386 IPR025756 -
Gma03g01530 481 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 255 309 IPR006447 GO:0003677
Gma03g01530 481 Gene3D - 254 313 - -
Gma03g01530 481 PANTHER PROTEIN PHR1-LIKE 1-LIKE ISOFORM X1 25 481 - -
Gma03g01530 481 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 25 481 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01530 Gma-Chr3 41572547 41576808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01530 6 429 G2-like Transcription Factor Family AT4G28610 49.423 4.91e-109 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma03g01530 Myb_DNA-binding 9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01530 - - gmx:100784711 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01530 03 41572547 41576808 Gma03g01530 03 41572547 41576808 ECH
Gma03g01530 03 41572547 41576808 Gma19g01585 19 45250634 45255910 ECH
Gma19g01585 19 45250634 45255910 Gma03g01530 03 41572547 41576808 GST
Gma03g01530 03 41572547 41576808 Gma10g00372 10 3548067 3554404 PCT
Gma03g01530 03 41572547 41576808 Gma13g01069 13 24858690 24863146 PCT
Gma10g00372 10 3548067 3554404 Gma03g01530 03 41572547 41576808 PCT
Gma13g01069 13 24858690 24863146 Gma03g01530 03 41572547 41576808 PCT