Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01523 ATGGGGAGTAGGGCTAAGCAGGGGAGGAGATTGCAGAAGATGATGAAGTGCATGTGCCTGAGGGAGCCGTTGAAGAAAGGAGGAGAAGATGAAACGGTTCCTTCCTCGGATTCTCTTGCAATCACGGAGTTTTATTCTTCAACGGCGAGTGGGCGTTCTGGCCTCGACGGAGAAATTGAGAAGATGGGGTCGGGTTCTGGGAACATGGATGAAGCTGAATTGTCCTTGCGTGAGAGTGGCATCATGGATATCATGGACAATGAGGAAGCTAGAGCTTTGTTAGGAAAAGATGAATATCAGGAAGGGAATATAGAAGCAGCTTTACGTATTTATGAGAGGATAAATATAAGTGCTGTGACTTCCAAGATGAAAATTTCCCTTGCCAAAAGCAGAGAACATCATAAGAAACATTCCCATTATTATGCTACGCCTCCGATGTCCATATACACGGTTGGATTACTGTTGGAAGCAATTTTCCTAAAAGCAAAATGTTTGCAGGTTCTGGGGAGGTTTAAAGAATCTGCCCAAACTTGTAAAGTTATTCTGGACATAGTTGAGTCTTCTTTACCTGAAGGCTTGCCTCAAAACTTTGGTCACGAGGGTAAATTGCAGGAGACTTTGGGTAAGGTAGTTGAGCTACTTCCAGAATTGTGGAAACTTGCTGATTCTCCCCGTGATGTTATTTTGTCTTACCGTCGTGCACTCCTTCACCAATGGAATCTTGATGCAAAAACCATAGCAAAGATTCAGAAAGAATTTGTTGTTTTTCTTCTATATAGTGGAGGGGAAGCAATCCCTTCAAATCTTCGTTCCCATATGGACAGCTCGTTTGTACCCAGAAACAACTTAGAAGAGGCTATACTTCTTTTAATGATTTTGCTGAGAAAAATATCTTTAAATAAAATTGAATGGGATCCGTCAATTTTGGATCACCTTTCGTTTGCTCTATCTGTTTCAGGGGATTTGACAACTTTAGCCCATCAATGGGAAGAATTACTCCCTGGGACTATCAATCGAAGAGAAAGATACCATGCCTTATCTCTTTGTTATTATGGCGCAGGTAATGACTTGGTAGCACTGAATCTTCTTAGGAAATTGTTGAGTAGTAGAGAGGACCCAAAACATGTTCCTTCTTTGTTAATGGCTTCTAAGATTTGTAGTGAGAACCCTGATCTTGCAAAAGATGGGGCAAGCTTAGCTCGCAAAGTGCTTGAGAACTTGGATGGAAGATGTGATCGGTTGGAAAGTCTTTCCAGTTGCTTACTTGGTGTTTCACTTTCAGCACACTCAAAAATTGATATTTCTAATTCTGAGAGGGTTGAGAAACAATCTGAGGCACTTCATTCTCTGGAAACTGCAAGCAAAGTGACCAAAATGAGTAACCCCCTTGTAATATACTACTTGAGCTTAGAATGTGCAGAGCAAAGGAAGTTGGATGCTGCACTTCATTATGCAAAATGCTTTCTAAACTTAGAAGTTGGGTCTAATATTAAAGGATGGTTATTGTTAGCCCGGATATTATCAGCTCAAAAACAGTTTTTGGACGCTGAATCTATTGTCAATGAAGCTTTGAATCAGACTGGAATATGGGATCAAGGAGAGTTACTGCGAACAAAAGCTAAACTACAAATAGCACAGGGCCAGTTGAAGAGTGCCATTGAAACATATACTCAGCTTCTTGCTATTCTCCTAGTTCAGAGAAAAACTTTTGGTTCAAAGAAGAAGCTGTATAAGGACTACATAGATCATGCTAGGAGCATGGAAGTTGAAATATGGCATGATCTTGCTTTTGTGTACATAAGTCTGTCACGGTGGCATGATGCAGAGGTGTGTCTTTCGAAATCTAAGGCCATCAAACTATACTCTGCTTCTAGATGTCATGCAATAGGTACAATGCACGAAGCAAAGGGCCTTTACAAAGAGGCTTTAAAAGCTTTTCGTGATGCTTTGAACATTGATCCTGGACATGTCCCTAGCTTGATCTCTGCTGCGGTTGTTCTTAGATGGTGCAGTAATCGATCAAATCCTGCTATCAGAAGCTTTCTGATGGATGCACTACGGCATGACAGATTTAATGCTTCTGCTTGGTATAATCTTGGTATTTTTCACAAGGATGAGGGTACAATTCTAGAAGCTGCAGAATGTTTTGAGACAGCAAACTCTCTTGAAGAATCCGCTCCGGTTGAACCCTTCAGATGA 2199 0.4111 MGSRAKQGRRLQKMMKCMCLREPLKKGGEDETVPSSDSLAITEFYSSTASGRSGLDGEIEKMGSGSGNMDEAELSLRESGIMDIMDNEEARALLGKDEYQEGNIEAALRIYERINISAVTSKMKISLAKSREHHKKHSHYYATPPMSIYTVGLLLEAIFLKAKCLQVLGRFKESAQTCKVILDIVESSLPEGLPQNFGHEGKLQETLGKVVELLPELWKLADSPRDVILSYRRALLHQWNLDAKTIAKIQKEFVVFLLYSGGEAIPSNLRSHMDSSFVPRNNLEEAILLLMILLRKISLNKIEWDPSILDHLSFALSVSGDLTTLAHQWEELLPGTINRRERYHALSLCYYGAGNDLVALNLLRKLLSSREDPKHVPSLLMASKICSENPDLAKDGASLARKVLENLDGRCDRLESLSSCLLGVSLSAHSKIDISNSERVEKQSEALHSLETASKVTKMSNPLVIYYLSLECAEQRKLDAALHYAKCFLNLEVGSNIKGWLLLARILSAQKQFLDAESIVNEALNQTGIWDQGELLRTKAKLQIAQGQLKSAIETYTQLLAILLVQRKTFGSKKKLYKDYIDHARSMEVEIWHDLAFVYISLSRWHDAEVCLSKSKAIKLYSASRCHAIGTMHEAKGLYKEALKAFRDALNIDPGHVPSLISAAVVLRWCSNRSNPAIRSFLMDALRHDRFNASAWYNLGIFHKDEGTILEAAECFETANSLEESAPVEPFR 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01523 732 Pfam Tetratricopeptide repeat 693 724 IPR019734 GO:0005515
Gma03g01523 732 Pfam Tetratricopeptide repeat 624 655 IPR019734 GO:0005515
Gma03g01523 732 ProSiteProfiles TPR repeat profile. 693 726 IPR019734 GO:0005515
Gma03g01523 732 PANTHER PROTEIN NPG1 7 732 IPR043376 -
Gma03g01523 732 Gene3D Tetratricopeptide repeat domain 64 563 IPR011990 GO:0005515
Gma03g01523 732 Gene3D Tetratricopeptide repeat domain 564 728 IPR011990 GO:0005515
Gma03g01523 732 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 7 732 - -
Gma03g01523 732 SUPERFAMILY TPR-like 340 562 IPR011990 GO:0005515
Gma03g01523 732 ProSiteProfiles TPR repeat profile. 623 656 IPR019734 GO:0005515
Gma03g01523 732 SUPERFAMILY TPR-like 534 723 IPR011990 GO:0005515
Gma03g01523 732 MobiDBLite consensus disorder prediction 50 70 - -
Gma03g01523 732 SMART tpr_5 155 188 IPR019734 GO:0005515
Gma03g01523 732 SMART tpr_5 693 726 IPR019734 GO:0005515
Gma03g01523 732 SMART tpr_5 623 656 IPR019734 GO:0005515
Gma03g01523 732 SMART tpr_5 589 622 IPR019734 GO:0005515
Gma03g01523 732 SMART tpr_5 533 566 IPR019734 GO:0005515
Gma03g01523 732 SMART tpr_5 497 530 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01523 Gma-Chr3 41470344 41475816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01523 15 732 Calmodulin-binding Proteins AT4G28600 54.235 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01523 K21843 - gmx:100784353 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01523 03 41470344 41475816 Gma03g01523 03 41470344 41475816 ECH
Gma19g01576 19 45169959 45175296 Gma03g01523 03 41470344 41475816 GST
Gma03g01523 03 41470344 41475816 Gma10g00366 10 3514119 3519863 PCT
Gma03g01523 03 41470344 41475816 Gma13g01064 13 24804044 24808909 PCT