Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01514 ATGGATTCTGCGAGAAGTTGGTTACAAAAATTTCAACCACGTGATAAATTGAGGGCCTCTACAAGGAACAAAGATGATACTAATGGCACAAATGAAATTCCAAATGTGCCTATGGATGATACATCTCTTTCCAATGTCACAAAACAAAAGGTTACGGCAGCCAAACAATACATTGAGAACCACTACAAGGAACAAATGAAAAGCCTTCAAGAGAGGAAGGAGCGTCGAACCATCTTGGAAAAGAAGTTGGCTGACGCTGATGTCTCCGAGGAAGATCAAAATAACCTACTTAAATTTTTAGAGAAAAAAGAAACTGAATATATGCGTCTTCAAAGGCACAAAATGGGTGTTGACGATTTTGAGTTACTAACTATGATTGGAAAAGGTGCATTTGGGGAGGTTAGAGTCTGTAAGGAAAAGGCTACGGATCATGTATATGCAATGAAAAAGTTAAAGAAATCAGAAATGCTTCGTAGAGGCCAGGTAGAACATGTTAGAGCTGAAAGGAATCTCCTAGCAGAGGTTGACAGCAATTGCATAGTTAAACTTTATTGTTCTTTTCAAGATGACGAATATTTGTATCTTATTATGGAATATCTACCGGGTGGAGATATGATGACTCTACTCATGAGAAAGGATACCTTGACTGAAGATGAAGCTCGATTTTATGTAGGAGAAACAATTTTAGCTATTGAATCTATACATAAACACAATTATATACATAGGGATATTAAGCCTGACAACTTGTTACTTGATAAATATGGACATTTGAGACTATCAGACTTTGGACTATGTAAACCATTAGACTGTAGTACACTTGAAGAAACAGATTTCACTACAGGTCAAAATGCGAATGGGTCTACACAAAATAATGAACATGTAGCTCCAAAACGCACACAACAAGAAAAATTGCAACATTGGCAGAAAAATAGAAGGACACTTGCGTATTCTACTGTTGGTACACCAGATTATATTGCTCCAGAAGTTCTATTGAAAAAGGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAAATGTTAGTGGGATATCCACCTTTTTATTCTGATGATCCAATGTCAACATGCAGGAAGATAGTAAATTGGAAATCTCACTTAAGATTTCCTGAAGAAGCAAGGTTATCTCCAGAAGCTAAAGATCTTATAAGTAAGCTTTTGTGTGATGTTAATCAGAGGTTGGGTTCAAATGGTGCAGATGAAATAAAGGCTCATCCATTCTTCAACGGTGTTGAATGGGATAAATTGTATCAAATGGAAGCTGCCTTTATTCCTGAGGTCAATGATGAGTTAGATACTCAAAATTTTGAAAAGTTTGAAGAGGTATAA 1359 0.3642 MDSARSWLQKFQPRDKLRASTRNKDDTNGTNEIPNVPMDDTSLSNVTKQKVTAAKQYIENHYKEQMKSLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCKEKATDHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETILAIESIHKHNYIHRDIKPDNLLLDKYGHLRLSDFGLCKPLDCSTLEETDFTTGQNANGSTQNNEHVAPKRTQQEKLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLRFPEEARLSPEAKDLISKLLCDVNQRLGSNGADEIKAHPFFNGVEWDKLYQMEAAFIPEVNDELDTQNFEKFEEV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01514 452 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 452 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gma03g01514 452 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 451 - -
Gma03g01514 452 SMART serkin_6 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01514 452 Gene3D Transferase(Phosphotransferase) domain 1 204 436 - -
Gma03g01514 452 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01514 452 ProSiteProfiles Protein kinase domain profile. 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01514 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Gma03g01514 452 Gene3D Phosphorylase Kinase; domain 1 118 447 - -
Gma03g01514 452 MobiDBLite consensus disorder prediction 9 25 - -
Gma03g01514 452 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Gma03g01514 452 SUPERFAMILY Protein kinase-like (PK-like) 93 448 IPR011009 -
Gma03g01514 452 CDD STKc_NDR_like 118 452 - -
Gma03g01514 452 MobiDBLite consensus disorder prediction 26 44 - -
Gma03g01514 452 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 24 451 - -
Gma03g01514 452 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01514 Gma-Chr3 41405837 41409859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01514 1 451 AGC Kinase Gene Family AT1G03920 77.564 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Gma03g01514 Pkinase 1.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01514 K08790 - gmx:100783286 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01514 03 41405837 41409859 Gma03g01514 03 41405837 41409859 ECH
Gma19g01570 19 45103685 45110809 Gma03g01514 03 41405837 41409859 GST
Gma03g01514 03 41405837 41409859 Gma10g00055 10 568506 582347 PCT
Gma10g00358 10 3437585 3445144 Gma03g01514 03 41405837 41409859 PCT
Gma13g01056 13 24727315 24734363 Gma03g01514 03 41405837 41409859 PCT