Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01495 ATGGAGGGAGGGAGAGGAGTTGTGAATGGAAACCCTTCAAACGCAGATGTTCGGTACAGAGGAATTCGTAGGAGGCCATGGGGCAAGTTTGCAGCAGAGATTCGTGACCCCACGAGAAAAGGGGCTCGCATATGGCTTGGAACCTTTGACACTGCTGAACAAGCTGCACGTGCTTATGATGCTGCTGCTTTTCATTTTAGGGGTCACAAGGCCATACTCAACTTCCCAAATGAGTATGGTAATGTCACTCCTAATCCAAATAACAATTATTCTTCAACTTCTTTGCCTCTTCCTTTGTTGTCGTCTTCCTCTTCTTCTTCTTCTTTCCCTTCCTACTATGGCGAGGGTTCGTCGCAACAACAACAAGGAAATGATGATGACACTTTTGAATTGGAATGCTTGGACAATAAGTTGTTGGAAGAACTCCTTCAGCAGGCGCCTGATCGTTCAGGCAACTGA 459 0.4619 MEGGRGVVNGNPSNADVRYRGIRRRPWGKFAAEIRDPTRKGARIWLGTFDTAEQAARAYDAAAFHFRGHKAILNFPNEYGNVTPNPNNNYSSTSLPLPLLSSSSSSSSFPSYYGEGSSQQQQGNDDDTFELECLDNKLLEELLQQAPDRSGN 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01495 152 MobiDBLite consensus disorder prediction 108 130 - -
Gma03g01495 152 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Gma03g01495 152 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Gma03g01495 152 Pfam AP2 domain 18 69 IPR001471 GO:0003700|GO:0006355
Gma03g01495 152 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Gma03g01495 152 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Gma03g01495 152 PANTHER DNA-BINDING DOMAIN 15 144 IPR044808 GO:0003700|GO:0009873
Gma03g01495 152 PANTHER - 15 144 - -
Gma03g01495 152 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Gma03g01495 152 MobiDBLite consensus disorder prediction 108 127 - -
Gma03g01495 152 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Gma03g01495 152 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01495 Gma-Chr3 41190069 41190846 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01495 17 143 AP2-EREBP Transcription Factor Family AT3G23230 59.843 1.16e-37 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma03g01495 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01495 - - gmx:100778998 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01549 19 44873051 44873685 Gma03g01495 03 41190069 41190846 GST
Gma03g01495 03 41190069 41190846 Gma10g00342 10 3235842 3236318 PCT
Gma03g01495 03 41190069 41190846 Gma13g01029 13 24453129 24453703 PCT
Gma10g00342 10 3235842 3236318 Gma03g01495 03 41190069 41190846 PCT
Gma13g01029 13 24453129 24453703 Gma03g01495 03 41190069 41190846 PCT