Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01489 ATGGGTACCAACTTGCACCAAGTACTCAGAAGCCTCTGTTTGAATACTCACTGGAACTACGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTGACATGGGAGGATGCATATTATAGCAATCCTGATGATTACGACTCTTCAGAAAATAAGCACTGCCAGAAGACCTTGGAACAGATTGGTTGTGGGAAATTTTCACCCAGTGCATTAGAGTTAGCAGTGGCTAAGATGTCATATCATGCATATTCATTAGGAGAAGGtatcattggacaggtagctgttactggaaagcataggtggatctgtgcagataatcaagttgcaggttctggcttgtcttttgagTTTGCGGATGGGTGGCAGTCTCAGTTTTCTGCCGGAATCAGGACTATTGCTGTTGTTGCTGTAGTCCCACTTGGTGTTGTTCAGCTTGGCTCTCTAAATAAAGTGATTGAAGATATGGAGTTTGTAACTCATATCAGAAATCTTTTTTTGTCTACTCAAAATTACTCAATCCTACGTCCTAGTCAAATACAGGGTAGTTTGAAGAGCTCATCTGAGCTGGATACATTGAAGGAAAATTTGTCTTCAGATATTATGCCTACTTGCTTTTACGATACACAGAAATCTATGAAAAGTGAAACAGCAGATGTTTTAATGCCCCTTCAATGTTCTGGGACTGGGAGGAACTATACACCTTCTGCTCATGAGAAAATGTCTGATAATGTGGCCAAGCAAGAGGGACCTGAATTGTACAATGATGAAAGTTCCATTTTGCTTCAGTCAATATCCAATATGATGAATGTGGACTGTAAGGAATTTGAAGAGATGAAACCTCTATATGGGATGAAGTATGAAGGTGGAAGTAGTGGCGACTGCAAAGATATGAGATTGGAATCAGAAAAAAATGTCTCATCATATTTAAATGATTTTGTTACAGATAATGCTAGCTTCAATGATTTAATATGTCCATCAGAAAAAGTCAGAGTTGATTCTGCATGCTTTCCTTCAGTTTTTCTTGATACAGTTGTTTGTGAAAGTGATAAATTGCATTATGCGGATATTAACCAAAAAGGGGCATTGAATTTTGCCCAACCTTCAGAAGCAAACTCCCAGCAACATATTGAAAAGTCAAAGTTTCATACTGAGCCTTGTTACAAGGATATCTCAGACTTTCAAACTGAACCTTGTTATAAGGATGCCTCACAGATGTTGAATTTTCCTGCTGGCTGTGAGCTACATGAAGCACTTGGACCAGCTTTTTCGAAAGTGGGTAAATGTTTTGATTGGCCAACACAGGTTAATCAAGAAATGAAACCTGTTGAAATGTCAGATGAGATTAGCACTAGCCAATTGACTTCTGAATCTTGTCCAGAACATCTTTTGGAAGCAATGCTGGTCAACATTAACCATAGTAATAATGATGTTAATAGTGAATTATCATTTTGTACATCAAAGCAATCTACAATGGCCTCTGCAAAAAATCATGAAGCTTCTATTCACAATGTGCATACTATTAATTCAGAAGGCTATTTGATGGATCAGCTCTCTCTTGTCAGAGAGGACAAACACCATTCTTTGAGTTCATCATCAGGGATATGTGGTGTGATGTCCTCAAAAGGTGTTTCATCTACATTTCATAGTTCAAATAGTGGACAGCTTGAAAGGTCGTCTGAACCATCCAAGAACAGCAAAAAAAGGGCCAGGCCAGGGGAAAGTTGTAGGCCTCGGCCACGGGATAGACAACTGATCCAAGATCGTATCAAGGAGTTGAGGGAGCTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTCCTGGAGCGTGCAATAAAGCACTTGCTCTTTCTCCAAAGCATAACTAAACATGCTGACAAGCTAACTGACTTTGCTGATACAAAGTCAAAGTTGCATCACAAGGAAGCAGACATTCTTGGATCCTCTAGTTATGATCAGGGCTCAAGCTGGGCCATGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTGGTAAGAATGGACAAATGCTTGTTGAGatgctctgtgaggaatgcagccattttcttgaaatagcagaagccataagaagtttgggccttaccattttaaagggtgcaacaaaagctcatggtgaaaagatatggatatgctttgtcgtcgagGGTCAAAACAACAAAAATGTACACAGATTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGCACGGTGTATTCACAATAA 2271 0.3606 MGTNLHQVLRSLCLNTHWNYAIFWKLKHRARMILTWEDAYYSNPDDYDSSENKHCQKTLEQIGCGKFSPSALELAVAKMSYHAYSLGEGIIGQVAVTGKHRWICADNQVAGSGLSFEFADGWQSQFSAGIRTIAVVAVVPLGVVQLGSLNKVIEDMEFVTHIRNLFLSTQNYSILRPSQIQGSLKSSSELDTLKENLSSDIMPTCFYDTQKSMKSETADVLMPLQCSGTGRNYTPSAHEKMSDNVAKQEGPELYNDESSILLQSISNMMNVDCKEFEEMKPLYGMKYEGGSSGDCKDMRLESEKNVSSYLNDFVTDNASFNDLICPSEKVRVDSACFPSVFLDTVVCESDKLHYADINQKGALNFAQPSEANSQQHIEKSKFHTEPCYKDISDFQTEPCYKDASQMLNFPAGCELHEALGPAFSKVGKCFDWPTQVNQEMKPVEMSDEISTSQLTSESCPEHLLEAMLVNINHSNNDVNSELSFCTSKQSTMASAKNHEASIHNVHTINSEGYLMDQLSLVREDKHHSLSSSSGICGVMSSKGVSSTFHSSNSGQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHLLFLQSITKHADKLTDFADTKSKLHHKEADILGSSSYDQGSSWAMEVGGHLKVHSILVENLGKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGATKAHGEKIWICFVVEGQNNKNVHRLDILWPLVQILQSKSTVYSQ 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01489 756 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Gma03g01489 756 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 570 619 IPR011598 GO:0046983
Gma03g01489 756 MobiDBLite consensus disorder prediction 547 585 - -
Gma03g01489 756 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 756 - -
Gma03g01489 756 MobiDBLite consensus disorder prediction 561 585 - -
Gma03g01489 756 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 756 IPR043561 GO:0003700|GO:0006355
Gma03g01489 756 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 583 625 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01489 Gma-Chr3 41128396 41136835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01489 1 751 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.227 1.23e-151 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01489 - - gmx:100776869 1503.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01489 03 41128396 41136835 Gma03g01489 03 41128396 41136835 ECH
Gma19g01543 19 44789727 44797106 Gma03g01489 03 41128396 41136835 GST
Gma03g01489 03 41128396 41136835 Gma10g00333 10 3131176 3137731 PCT
Gma10g00333 10 3131176 3137731 Gma03g01489 03 41128396 41136835 PCT