Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01472 ATGGGATTCAAAGATAGGAGAAATTGTCCTCATCTATGTAGATTGGCTTCTGAATACATACGGAAATACGAGGGATTTGAAGATGATATATACGCCTTCTTTGAGAATGAACCAGATGCTGATTCACTTTATGTGAAGCTCGTAGAGGAGTTTGAGAGATGCATTCTTAGTTACTTAGGATTCCATTGGAACTACGGTGATCTAGTTATGAGTCAGGTGTTGAGCTCGGAAAATGAGCCAAAAAAGAAGCTCAAGAGCATagttatggcagctacaagGGAACAAAGGATTGAGAGACTTGCCAAGAAtctgaaggtagctagagtttttaatacattagtagaagagatgaaagcaatgagagttgctacaagtgatgactctcgatgtACAGAAGTGATGGCTCCAGTAGCTCATAGCGATAGGAGTCCAGTGCTTCTGTTAATGGGTGGAGGTATGGGAGCTGGCAAGAGCACCGTGCTCAAAGATATTCTCAAAGAACCTTTCTGGGCAGGAGCAGCCGCAAATGCCGTAATAATTGAGGCAGATGCCTTCAAAGAATCAGATGTCATCTATAAGGCCCTTAGCTCAAGAGGTCACCATGACATGATCCAAACAGCAGAACTGGTACATCAATCATCCACAGATGCAGCCTCATCCCTCCTAGTAACAGCATTAAACGAGGGACGAGATGTTATTATGGATGGCACACTCTCCTGGGTGCCATTTGTTGTGCAGACAATAACAATGGCTAGGAATGTTCACCGTCGCCGTTACCGCATGGGAGAAGGCTATAGGGAGAAGGAGGATGGAACAGTAATCGAAAACTATTGGGAAAGAATTAAAGATGAAGAACCTGAACAAGTTGGTGGCAAAAAGAGAAAACCATATAGGATAGAGCTGGTTGGTGTTGTGTGTGATGCTTATCTTGCAGTTGTCAGAGGCATAAGGAGAGCTATCATGTGCAGAAGAGCAGTGAGAATAAAGTCACAGTTGAAATCCCACAGGAGATTTGCTGAGGCATTTATGACTTACTGTCAACTAGTAGATAATGCACGCCTATACTTCACAAACGCATTAGAAGGCCCAGCTAAGTTGATAGGATGGAAAGATAGAGACAAAACACTGCTTGTTGATCCAGATGAATTCGACTGTATGAAGAGGCTAGCCATGCTGAATGAAGATGCAAACTCCATTTATGAACTTTACAAGCACCCCAACCCAGCTTGTGAAGCTGGATCAGTATGGAAAGACATTGTATTATCTCCTTCAAGGTTGAACATCCAACAAGAGCTCAAGTATTCAATCCAAAAAATTGAAAGCATGAACTATAATAAAGTCACCATGGAGAACAGATGA 1359 0.3951 MGFKDRRNCPHLCRLASEYIRKYEGFEDDIYAFFENEPDADSLYVKLVEEFERCILSYLGFHWNYGDLVMSQVLSSENEPKKKLKSIVMAATREQRIERLAKNLKVARVFNTLVEEMKAMRVATSDDSRCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGAAANAVIIEADAFKESDVIYKALSSRGHHDMIQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGEGYREKEDGTVIENYWERIKDEEPEQVGGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRIKSQLKSHRRFAEAFMTYCQLVDNARLYFTNALEGPAKLIGWKDRDKTLLVDPDEFDCMKRLAMLNEDANSIYELYKHPNPACEAGSVWKDIVLSPSRLNIQQELKYSIQKIESMNYNKVTMENR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01472 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 279 IPR027417 -
Gma03g01472 452 Pfam Zeta toxin 138 249 IPR010488 GO:0005524|GO:0016301
Gma03g01472 452 Gene3D - 127 365 IPR027417 -
Gma03g01472 452 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 451 - -
Gma03g01472 452 PANTHER UNCHARACTERIZED 1 451 IPR044802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01472 Gma-Chr3 40938198 40941679 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01472 - - gmx:121172610 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01530 19 44635351 44640423 Gma03g01472 03 40938198 40941679 GST
Gma03g01472 03 40938198 40941679 Gma02g01283 02 14932062 14939871 PCT
Gma02g01283 02 14932062 14939871 Gma03g01472 03 40938198 40941679 PCT