Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01470 ATGGTTCAAGTAAGCAAGAAAATTAGCATTATTGACTATTGTTTGGCATTTTTGGCTTTTGACAACGTGATTTTCAAGAGGGTGGTGGTGAAGTTTGGAATTATTTCATTTCGCGTATCACAGTTCGGTTCAGTCTCACGAGTGACCCGTGACTTGGAAATGATGAATTCTGCATTCCACTCAATCTCGAATCCATGGAATGAGAATCTAGGGTTTGACAGCACCAAGTCCATCAAGATAGAGGGTAATATGGAGGATGTTGAAGAAGCTAATAGAGCAGCTGTTGAGAGCTGTCATAGAGTTCTGAGTATGATGTCTCAGCCAGGGAATGAAGTTCATTGTAGGAATTTGATGGTGGAAACTGGAGGGGCTATAGTGAGGTTCAAGAAAGTTGTTTCACTCCTAAGTAGTGGTTTGGGTCATGCAAGATTTCCTCATACAATTTTTACTGAGAATTCAGTTCAGGGATTGGGTCAAACAGTTAGAAATTCAATCTATATGATGGGAAACCCTAGTTTGGAGTTGAGCTCCAATGAGAGAAGCCCTCTAAACCTTACCCGACAAACTTCAGCAACACATTACCACTTCCTTCAGCAGCAACAAATGAAACATCAAGCAGAAATGATGTTTCGAAGGAACAACAGTGTCGTAAATTTGAATTTTGACAGCTCTAGCTGCACACCATCGATGTCGTCGTCTACTAGGTCTTTCATTTCTTCCTTGAGCATAGATGGAAGCGTGGCTAACATGGATGGAAATGGAAGTGCATTCCATTTATTAGGAGCTGCACACTCTTCTTATCAGAATTCACAACAGCAAAAGAGAAAGTGTTCTGCCAGAGGTGATGAGGGTAGTGTGAAGTGTGGGAGCAGTGCAAGATGTCATTGCTCAAAGAAGAGGAAACATAGAGTGAAAAGATCAGTTAAGGTGCCTGCTACCAGCAACAAACTTGCGGATATCCCTCCCGATGATTATTCATGGAGGAAGTATGGGCAGAAACCAATCAAGGGATCACCTCACCCTAGGGGATACTATAAGTGCAGCAGCACCAGAGGGTGTCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTTCCATGCTAATTGTTACCTATGAAGGCGATCACAACCATCCCAAGTTACAACACAATCCACAAATACGTGAACTACATTGA 1179 0.4266 MVQVSKKISIIDYCLAFLAFDNVIFKRVVVKFGIISFRVSQFGSVSRVTRDLEMMNSAFHSISNPWNENLGFDSTKSIKIEGNMEDVEEANRAAVESCHRVLSMMSQPGNEVHCRNLMVETGGAIVRFKKVVSLLSSGLGHARFPHTIFTENSVQGLGQTVRNSIYMMGNPSLELSSNERSPLNLTRQTSATHYHFLQQQQMKHQAEMMFRRNNSVVNLNFDSSSCTPSMSSSTRSFISSLSIDGSVANMDGNGSAFHLLGAAHSSYQNSQQQKRKCSARGDEGSVKCGSSARCHCSKKRKHRVKRSVKVPATSNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSTRGCPARKHVERCLEEPSMLIVTYEGDHNHPKLQHNPQIRELH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01470 392 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 85 152 IPR044810 GO:0003700
Gma03g01470 392 Pfam WRKY DNA -binding domain 323 380 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g01470 392 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 85 152 - -
Gma03g01470 392 Gene3D WRKY domain 305 381 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma03g01470 392 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 172 382 IPR044810 GO:0003700
Gma03g01470 392 Pfam Plant zinc cluster domain 274 319 IPR018872 -
Gma03g01470 392 ProSiteProfiles WRKY domain profile. 316 382 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g01470 392 SMART WRKY_cls 321 381 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma03g01470 392 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 172 382 - -
Gma03g01470 392 SUPERFAMILY WRKY DNA-binding domain 319 381 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01470 Gma-Chr3 40920833 40926630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01470 84 382 WRKY Transcription Factor Family AT5G28650 49.398 4.19e-96 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma03g01470 WRKY 6.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01470 - - gmx:100127372 551.206