Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01460 ATGGGGAGCTTTGAAACTGAACTGATGAATCTTAAGGCCACAGAGTTGAGGTTGGGACTGCCCGGCTGTGATGAAACTAATGAGAAAAGTTCATCCAGTAGTGGATCTGTTGTTAGAAGCAACAAGAGATCTTCACCAGAACCCAGTGTGGAAGAGTCCAGGTGCAACTCTAATGGTTCTTCAGATTCTACCACCACAAGTGATCATGATCAAGACAGTGCCCAACCTGAAAAGGTACAAGTAGTGGGGTGGCCACCAATTAGATCTTTTAGGAAGAACAGTCTGCAACAACAGAAGAAGGTGGAGCAGCTGCAGGGTGATGGAGGTGGAATGTACGTGAAAGTGAGCATGGCTGGTGCACCTTACTTGAGGAAGATAGATCTCAAGGTTTACAATAGCTACCCAGAACTCCTCGCAGCCTTGCAAAGTTTGTTCACGTGCACATTTGGTGAATATTCAGAGAGGGAAGGTTACAATGGATCTGAATACGCTCCAACTTATGAAGACAAGGATGGTGACTGGATGCTTGTTGGAGATGTTCCATGGAACATGTTTGTATCCTCCTGCAAGAGGCTGAAGATAATCAAAGGATCAGAAGCAAAGGGTTTGGGTTGTTTGTGA 621 0.4541 MGSFETELMNLKATELRLGLPGCDETNEKSSSSSGSVVRSNKRSSPEPSVEESRCNSNGSSDSTTTSDHDQDSAQPEKVQVVGWPPIRSFRKNSLQQQKKVEQLQGDGGGMYVKVSMAGAPYLRKIDLKVYNSYPELLAALQSLFTCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLKIIKGSEAKGLGCL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01460 206 SUPERFAMILY CAD & PB1 domains 108 194 - -
Gma03g01460 206 MobiDBLite consensus disorder prediction 18 82 - -
Gma03g01460 206 MobiDBLite consensus disorder prediction 25 70 - -
Gma03g01460 206 Pfam AUX/IAA family 14 204 IPR033389 -
Gma03g01460 206 PANTHER AUXIN-INDUCED PROTEIN 9 204 - -
Gma03g01460 206 ProSiteProfiles PB1 domain profile. 110 202 IPR000270 GO:0005515
Gma03g01460 206 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 9 204 IPR003311 GO:0005634|GO:0006355
Gma03g01460 206 Gene3D - 104 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01460 Gma-Chr3 40832803 40834392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01460 102 203 B3 DNA Binding Superfamily AT2G46530 36.275 8.35e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma03g01460 AUX_IAA 6.2e-60 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01460 K14484 - gmx:100809479 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01520 19 44553574 44554727 Gma03g01460 03 40832803 40834392 GST
Gma03g01460 03 40832803 40834392 Gma10g00303 10 2805057 2806827 PCT
Gma03g01460 03 40832803 40834392 Gma02g01300 02 15072998 15074642 PCT
Gma10g00303 10 2805057 2806827 Gma03g01460 03 40832803 40834392 PCT
Gma02g01300 02 15072998 15074642 Gma03g01460 03 40832803 40834392 PCT