Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01453 ATGGGTCTGGAAAAGAATCCTCGTGTGTTTTTCGATGTCTCAATCGACGGAGACCCTGTGGAAAGAATTGTTATTCAGctttttgccagtatagttcctaggacagcggagaattttcgggcactttgtacagGTGAGAAGGGCATTGGAGAATCAACGGGGAAACCTTTGCATTATAAAGGGACAAGCCTTCATCGTATAATTAGAGGTTTTATGGCTCAAGTAAGAACAACCTTTGACTGCTTTACAGGCACAGGTGGAGAAAGTATATATGGGGGGAAATTTGCAGATGAAAATTTCAAACTAACACATGATGGACCTGGCATTCTTTCTATGGCTAATAGTGGTCCTAACACAAATGGATCTCAGTTCTTTATTACATTCAAGCGCCAACCTCATCTTGACGGGAAACATGTTGTTTTTGGAAAAGTTGTCAACGGAATAGACATTTTGAAGAAAATTGAGCAGGTGGGAACATCTGATGGGAAACCTACCCAGCCAGTTAAAATTATTGATTGTGGTGAAGTCTCTGAAACAAAAATTCAGCATACTGCAGAGAAGGAGAAAGGAAAAAGGAGAAAATCTGGGAAGTCCTTATCTTCTGATGATGGTTCTGACAAAAAATCAAGGGGAAAAAGGAAAAAATCTTCCAAAGACACAAGGAAGAGAAGGAGGAGATACTCAACATCTGATAGTGATAGCTATTCCtcagattctgagtcagattcagattctgaatcggattcaTCAGTTTCTGATTCTAGTTCCTCTAGTGATGGGAAACACCAGAAGAGGAGGAGAAATAAGCACAAGCATGGGAAGAAGAGGAAAATTGGACGAAAGCAGCGGAAGAGAAGCCAGCACGGTAGAACTAAAAAATCAAGACACAAGTCTAGGCGGAGCTCTGAGGATTCAAGTGATACAAATAGTGATAGCGCTAGTGGCAGTAGTTCTAGCGATGAGAAAGCTGATCGTCATGCCTCAGGTCGTAAAGCACCTGCTGACAATAAAGCCCAAAGAAATCTAGACACAGGAAAGCAATTTTCCAACCCTTCTTGTCAAAGGCAAACTATTCCTGAACAAACAATGGATCCCAAGGTAAGAAGAATTGTGGACAAGCAATCACATGAAGAAGGTGAATTCTCTCCGGAGAATGGTGCATTTGTGAATAACAGGCATGATACTCAAGCTGAATTTAGTAAACCTGCTAAGCAACATGCTAATTCAGATGATTCAAATCACAATAGAGGTGCAAGTCCTGGAAGAAGTCCTACCAGGGATTCTGGGGAGCTAAACCAAGGACGTGCTTTGTTGTTGGCTagtcctggcaaaaaaagtcctggccaaaaaGCATCTGAACCTCCTGCCCCCAAACATGGTCAGGGATTTTCAAAAAGCCCTTCACCAAATAGCATGCCTAAGCGTATTAAAAAAGGGCGTGGCTTTACTGAGCGTTATGCCTTTGCACGAAGATATCGCACTCCATCTCCAGAGCGGTCTCCTCCTCATTCATATCGTTATGGTGATAGAAATATAAGAAGGAACTTTGATAGAAACACAAGCTACAGAAGTTATTCTGGGCGCTCTCCACCACGACGTTTTCGAAGCCCGCCAGGGGGCAGGAATCGTCCAAGATACCAAAGCAGAAGAAGTAGGAGTAGGAGCATCTCTGGCAGTCCAGTGCGTGGGCGTTTTAGAGAGCGTGACCGCAGCAGGAGTCCAAGACGTAGTCCTAGTCCAGAAGACAGGCTGCCTCTGATAAGTGACAGATTAAAATCCAGACTTGGTCCAAGAAGTGACGAAGGACTGCGAGACAGGGGGAGGTCGAGGTCGAGGTCGAAATCTAGGAGCAAAGGCTCTTCTCACTCCAGATCCCCTGATGCCACACCACCAAAACGATATGATAAAAGGACTTCTGTACCTCGTAGCAGGTCTAGATCCAGCTCTGCATCCGGCCAAAAGGGTTTAGTTTCTTATGGAGATGCCAGTCCTGATTCTGGCTCAAGGTAG 2010 0.4164 MGLEKNPRVFFDVSIDGDPVERIVIQLFASIVPRTAENFRALCTGEKGIGESTGKPLHYKGTSLHRIIRGFMAQVRTTFDCFTGTGGESIYGGKFADENFKLTHDGPGILSMANSGPNTNGSQFFITFKRQPHLDGKHVVFGKVVNGIDILKKIEQVGTSDGKPTQPVKIIDCGEVSETKIQHTAEKEKGKRRKSGKSLSSDDGSDKKSRGKRKKSSKDTRKRRRRYSTSDSDSYSSDSESDSDSESDSSVSDSSSSSDGKHQKRRRNKHKHGKKRKIGRKQRKRSQHGRTKKSRHKSRRSSEDSSDTNSDSASGSSSSDEKADRHASGRKAPADNKAQRNLDTGKQFSNPSCQRQTIPEQTMDPKVRRIVDKQSHEEGEFSPENGAFVNNRHDTQAEFSKPAKQHANSDDSNHNRGASPGRSPTRDSGELNQGRALLLASPGKKSPGQKASEPPAPKHGQGFSKSPSPNSMPKRIKKGRGFTERYAFARRYRTPSPERSPPHSYRYGDRNIRRNFDRNTSYRSYSGRSPPRRFRSPPGGRNRPRYQSRRSRSRSISGSPVRGRFRERDRSRSPRRSPSPEDRLPLISDRLKSRLGPRSDEGLRDRGRSRSRSKSRSKGSSHSRSPDATPPKRYDKRTSVPRSRSRSSSASGQKGLVSYGDASPDSGSR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01453 669 MobiDBLite consensus disorder prediction 561 608 - -
Gma03g01453 669 MobiDBLite consensus disorder prediction 318 337 - -
Gma03g01453 669 MobiDBLite consensus disorder prediction 503 517 - -
Gma03g01453 669 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 174 IPR002130 GO:0000413|GO:0003755
Gma03g01453 669 MobiDBLite consensus disorder prediction 628 642 - -
Gma03g01453 669 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 175 IPR002130 GO:0000413|GO:0003755
Gma03g01453 669 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 135 IPR002130 GO:0000413|GO:0003755
Gma03g01453 669 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 IPR002130 GO:0000413|GO:0003755
Gma03g01453 669 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Gma03g01453 669 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 108 123 IPR002130 GO:0000413|GO:0003755
Gma03g01453 669 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Gma03g01453 669 MobiDBLite consensus disorder prediction 181 669 - -
Gma03g01453 669 MobiDBLite consensus disorder prediction 412 430 - -
Gma03g01453 669 SUPERFAMILY Cyclophilin-like 5 176 IPR029000 -
Gma03g01453 669 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 410 - -
Gma03g01453 669 MobiDBLite consensus disorder prediction 397 411 - -
Gma03g01453 669 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 4 410 - -
Gma03g01453 669 MobiDBLite consensus disorder prediction 262 297 - -
Gma03g01453 669 MobiDBLite consensus disorder prediction 365 380 - -
Gma03g01453 669 MobiDBLite consensus disorder prediction 181 210 - -
Gma03g01453 669 Gene3D - 2 183 IPR029000 -
Gma03g01453 669 MobiDBLite consensus disorder prediction 340 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01453 Gma-Chr3 40774194 40779756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01453 3 172 U-box Gene Family AT5G67530 44.318 3.97e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01453 K09566 - gmx:100807327 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01512 19 44485676 44491690 Gma03g01453 03 40774194 40779756 GST