Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01443 ATGGGTAACGCAGACTATGCTTACCCTTCGGGTATGAACGTGGAGAGCGTGCACCGAGTGGCCATTCCACCCCCTCAACCCTTCTTCAAGTCCCTAAAGTACTCTATGAAAGAGACTTTTTTCCCAGATGACCCGTTTAGAAAGTTCAAGAACCAGCCAGCTTCTAAGAGGTTCATGCTTGGGCTTCAGTACTTCTTCCCCATCTTCGAGTGGGCTCCCAAGTACACCCTCCACTTCCTGAAATCAGACCTCATATCTGGCATCACCATTGCTAGCTTGGCCATTCCTCAGGGCATCAGTTATGCCAAGCTAGCCAACCTCCCTCCAATTCTTGGACTTTATTCGAGCTTTACACCGCCATTGATTTATGCAATGATGGGAAGCTCAAGGGATTTGGCAGTGGGAACAGTGGCGGTTGGATCGCTTCTGATGGCTTCCATGTTGGGTCGAGTGGTTAATTTCAACGAGAATCCAAAGCTTTTTCTCCACTTGGCTTTCACTGCTACGTTCTTTGCTGGAGTTTTGCAGGCATCACTCGGTCTCTTCAGGTTAGGGTTTATCGTGGATTTTGTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCTACAGTGGTTTGTCTGCAACAGTTGAAATCAATCCTTGGCCTAGAGCATTTTACCCACGAGGCCGATCTCGTGTCAGTTATGCGCTCTGTTTTTTCCCAAACGCATGAGTGGAGGTGGGAAAGCGCTGTGTTGGGTTGTTGCTTTATTTTCTTCCTCCTCGTCACAAGATACTTCAGCAAACGACAGCCAAAGTTCTTCTGGGTGTCAGCAATGGCACCACTGACGTCCGTTATATTGGGAAGTCTGCTGGTCTATGTCACACACGCTGAGAAACATGGAGTTCAAGTGATAGGAAATTTGAAGAAGGGGCTGAATCCACCTTCGGCAACGGATTTGGTGTTTGTGTCACCTTACATGGGCACTGCCATAAAAACTGGATTCGTCACTGGCATTATAGCACTTGCGGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTTTAAAAATTATCATATTGATGGCAACAAAGAGATGATAGCTATTGGAACCATGAATATTTTCGGATCGTTCACTTCTTGCTATCTCACCACAGGACCATTTTCGCGGTCAGCAGTGAACTACAATGCTGGGTGCAAAACTGCTGCATCAAACATTGTAATGGCAATAGCAGTGATGTTGGCATTGTTATTCTTAACACCCTTGTTCCATTTCACTCCCCTGGTGGTGCTATCAGCCATAATTGTATCAGCAATGCTCGGGCTCATAGATTATCAAGCAGCCATTCATTTGTGGAAAATCGACAAATTTGATTTCTTAGTGTGCTTCACTGCTTATGTTGGCGTAGTCTTTGGCAGTGTTGAAATTGGCCTAGTCATAGCAGTTGCAGTATCTCTGCTTCGAGTACTTCTATTTATTGCAAGGCCAAGGACATTTCTCTTAGGCAACATTCCAAATTCTGCAGTATACAGAAATGTGGAACAATATCCAAATGCAAATCATATTCCTGGAATCCTAATTCTTGAAATTGATGCACCCATTTACTTTGCCAATGCAAGCTATTTAAGGGAAAGGATCACAAGGTGGATTGATGAAGAGGAAGATAGAATCAAAGCTACAGAGCAAACCAGTTTGCAATATGTTATAATGGACATGACCGCTGTTGCTAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGTGCAAGAAGACTGTTGACAGAAGAGGGTTACAACTTGCTTTGGTGAATCCAGGAAGCGAGGTGATGAAGAAGCTGAACAAATCCAAGTTCCTTGATGAACTGGGGCAAAAATGGATCTATCTGACAGTTGAAGAGGCTGTTGGTGCGTGCAACTTCATGCTCCATTCCTACAAACCGAACCCCATGAAGGATGAATCAGAAGTGGACCAAAGACAAAGATCGCGTGTTCCGACTTCCGATGAATTGTTCGTGCTGCTATGTTCAATGGCACCCATCCAGAAAAAATCgaagaccaagaagaagaccaagaagTTCAAAAAACACAAACAGGTGAGCCTGGTCCCCGTTGAGCCCAGAACCAGTGAGACCGATTGGTGGGACTCTTTCTGGCACAAGAATTCTACTGTCCCAGGATATACTGTACCTGGTGATGAGGCAGAAGGGTTTAAGTATTTCTTCAGGGTGTCAAAGACTACTTTTGAATACATATGTTCCCTTGTGAGGGAGGATCTCATATCAAGGCCTCCATCAGGGCTCATCAACATAGAGGGAAGGCTTCTTAGTGTTGAGAAGCAGGTTGCCATTGCCCTTAGAAGGTTGGCATCTGGTGAGTCTCAGGTCTCAGTTGGAGCTGCCTTTGGGGTTGGACAGTCAACAGTTTCTCAGGTGACTTGGAGATTCATAGAGGCGCTGGAGGAACGCGCCAAGCATCATCTCAATTGGCCGGATTTCAATCAAAtgcaggaaatcaagcttggttttgaggcatcctatgggttgcctaattgctgtggagccatcgatgcaacgcacatcATGATGACCCTTCCGGCTGTCCAAACCTCGGATGATTGGTGTGATCAAGAGAAGAACTACAGCATGTTGTTGCAGGGAATTGTTGATCATGAAATGAGATTTGTTGATATCGTGACAGGTTTGCCTGGGGGCATGTCGGTTTCCAGATTGTTGAAGTGTTCGGCATTTTTCAAGCTATCAGAGAATGGAGAGCGTTTAAATGGAAACGTGAAAGCTTTCGGTGGAGATGTTATAAGAGAATATGTGGTTGGTGGGTGCAGTTATCCTCTTCTTCCGTGGCTTATGACTCCTTATGAAACTAATGGGGCTAATGGCGTATCAGTTCCGCAGTCTACTTTCAATCACAAACATGGAGCTGCAAAGCTACTTGCTGTGAGGGCATTCTCACTGTTAAAGGGAAGTTGGAGAATCCTGAGTAAGGTTATGTGGAGACCTGATAAGAGGAAATTGCCAAGCATTATCTTAACATGTTGTTTGCTCCATAATATAATCATTGACTGTGGAGACACCTTACAACAGGACGTTGCCTTGTCTGGTCATCATGATTCTGGATATCAAGAACAATGTTGCAAGCAAGTTGATCCTTTGGGGAGGACCATGAGAGATAATTTGGCCAACCATTTGCGACAGTAA 3201 0.4349 MGNADYAYPSGMNVESVHRVAIPPPQPFFKSLKYSMKETFFPDDPFRKFKNQPASKRFMLGLQYFFPIFEWAPKYTLHFLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFTPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGRVVNFNENPKLFLHLAFTATFFAGVLQASLGLFRLGFIVDFVSHATIVGFMGGAATVVCLQQLKSILGLEHFTHEADLVSVMRSVFSQTHEWRWESAVLGCCFIFFLLVTRYFSKRQPKFFWVSAMAPLTSVILGSLLVYVTHAEKHGVQVIGNLKKGLNPPSATDLVFVSPYMGTAIKTGFVTGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIFGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLALLFLTPLFHFTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFLVCFTAYVGVVFGSVEIGLVIAVAVSLLRVLLFIARPRTFLLGNIPNSAVYRNVEQYPNANHIPGILILEIDAPIYFANASYLRERITRWIDEEEDRIKATEQTSLQYVIMDMTAVANIDTSGISMLEECKKTVDRRGLQLALVNPGSEVMKKLNKSKFLDELGQKWIYLTVEEAVGACNFMLHSYKPNPMKDESEVDQRQRSRVPTSDELFVLLCSMAPIQKKSKTKKKTKKFKKHKQVSLVPVEPRTSETDWWDSFWHKNSTVPGYTVPGDEAEGFKYFFRVSKTTFEYICSLVREDLISRPPSGLINIEGRLLSVEKQVAIALRRLASGESQVSVGAAFGVGQSTVSQVTWRFIEALEERAKHHLNWPDFNQMQEIKLGFEASYGLPNCCGAIDATHIMMTLPAVQTSDDWCDQEKNYSMLLQGIVDHEMRFVDIVTGLPGGMSVSRLLKCSAFFKLSENGERLNGNVKAFGGDVIREYVVGGCSYPLLPWLMTPYETNGANGVSVPQSTFNHKHGAAKLLAVRAFSLLKGSWRILSKVMWRPDKRKLPSIILTCCLLHNIIIDCGDTLQQDVALSGHHDSGYQEQCCKQVDPLGRTMRDNLANHLRQ 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01443 1066 SUPERFAMILY SpoIIaa-like 513 634 IPR036513 -
Gma03g01443 1066 Gene3D STAS domain 491 636 IPR036513 -
Gma03g01443 1066 Pfam STAS domain 512 630 IPR002645 -
Gma03g01443 1066 Pfam Sulfate permease family 80 460 IPR011547 GO:0016021
Gma03g01443 1066 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Gma03g01443 1066 Pfam DDE superfamily endonuclease 851 1018 IPR027806 -
Gma03g01443 1066 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 653 - -
Gma03g01443 1066 TIGRFAM sulP: sulfate permease 67 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma03g01443 1066 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
Gma03g01443 1066 PANTHER SULFATE TRANSPORTER 2 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma03g01443 1066 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01443 Gma-Chr3 40623464 40636878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01443 18 644 Inorganic Solute Cotransporters AT4G02700 67.834 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01443 K17471 - gmx:100804670 1278.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01443 03 40623464 40636878 Gma03g01443 03 40623464 40636878 ECH
Gma19g01500 19 44337474 44345916 Gma03g01443 03 40623464 40636878 GST
Gma03g01443 03 40623464 40636878 Gma10g00279 10 2547132 2557067 PCT
Gma03g01443 03 40623464 40636878 Gma02g01322 02 15347407 15355845 PCT
Gma10g00279 10 2547132 2557067 Gma03g01443 03 40623464 40636878 PCT
Gma02g01322 02 15347407 15355845 Gma03g01443 03 40623464 40636878 PCT