Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01430 ATGCCAAACACAAACACGCCGCCAACAAGAAAAAGAAACAACCTCAGCCGCTACAACCTGAAACTATGTTTCTCCAATCCCATGCAACCGTTCACACCCAAATCTCATCCGACAAACCCCACCGCCACTTCCTCACCCGTTCATCACAATCACAACCATCCATCACCACCCGCCACGTCATCAACCCTAATCAAGGACTTCAACCATGATCGCAGTACCGTGACCCCACAAAACCCATTTCCGAGCCTTGGACCCGAACCCAAACCTGCCGACTTGGTCACCGCTTTTGCCTCCCAACGATTCTTCTTCACCTCCCCCGGCCGCTCCAACTCCATCGTCGAATCCGCCAACACCACCGACACCGACTGCACCACATCCTCATCCATTGACGAAAGACAGGACCAATTCAAGAgtttcattcatgattctgacgaaagggaagcaaaggcgttattgGACAGCAGCATTGCAGTAACGAAGTACTCGCCGGACCCTTACGCGGACTTCCGGCAGTCGATGGAGGAGATGGTGGCGGCGCGTCCCGAGTTGATGGACGTGGCGTCCAAATGGCGCGAGCTGCACGAGCTTCTTCTTTGTTATCTTGCGCTCAACCCGAAAAGCACGCACAAGTTCATTCTCCGTGCTTTTTCTGATTTTCTCCTCAGCCTCATATCGCGTTCTTATTTTCCGCCGCAGGATCCCGGTTCCGATGACGATGACGTTGCCGGCGACGGCGGTGGATGTTCGAGTTAG 753 0.5113 MPNTNTPPTRKRNNLSRYNLKLCFSNPMQPFTPKSHPTNPTATSSPVHHNHNHPSPPATSSTLIKDFNHDRSTVTPQNPFPSLGPEPKPADLVTAFASQRFFFTSPGRSNSIVESANTTDTDCTTSSSIDERQDQFKSFIHDSDEREAKALLDSSIAVTKYSPDPYADFRQSMEEMVAARPELMDVASKWRELHELLLCYLALNPKSTHKFILRAFSDFLLSLISRSYFPPQDPGSDDDDVAGDGGGCSS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01430 250 PANTHER TRANSCRIPTION REPRESSOR OFP12 18 228 - -
Gma03g01430 250 MobiDBLite consensus disorder prediction 1 79 - -
Gma03g01430 250 MobiDBLite consensus disorder prediction 1 90 - -
Gma03g01430 250 Pfam Transcriptional repressor, ovate 162 223 IPR006458 -
Gma03g01430 250 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 156 224 IPR006458 -
Gma03g01430 250 ProSiteProfiles OVATE domain profile. 158 222 IPR006458 -
Gma03g01430 250 MobiDBLite consensus disorder prediction 231 250 - -
Gma03g01430 250 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 18 228 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01430 Gma-Chr3 40513983 40514946 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma03g01430 Ovate 1.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01430 - - gmx:102659610 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01487 19 44220067 44221117 Gma03g01430 03 40513983 40514946 GST
Gma03g01430 03 40513983 40514946 Gma10g00264 10 2433351 2434016 PCT
Gma03g01430 03 40513983 40514946 Gma02g01333 02 15485902 15486641 PCT
Gma10g00264 10 2433351 2434016 Gma03g01430 03 40513983 40514946 PCT
Gma02g01333 02 15485902 15486641 Gma03g01430 03 40513983 40514946 PCT