Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01371 ATGGTGGAAGTGCATGAAAAATGCAACAACAATAATGAGCTTCACCTAGATCTGAGATCTGCTCCTCCCTATGTGTTTGTACAGGTGGATCTCCTTGGCCAACGTCTCCGACAACTTCTAAAGGAGAAAGAGGGTATGGTGGTTGTGACAGCAAGTGGTCAGAGAAAGCAGAGGGGGAATGCACATGGTGGTTATGCAATCGACGATCGAGAGCCGCTCTCTCCATTTCCATCTACTCCCACATGCTCAAACGCAAGAGCTTCCCTGGCCGCAAACAACACCCTCCCATGTCCCCTGAACATAACCGTCCTCCGCGTGGTGAGCGGCGGGCGGCGGCCGTCGTTCGACTCGGGAACAAAGTGCCACTACATCCTGCAAGCCCTCCACCTCCTCCAGGCCGACTACCTCCGTCGCAGCAGCCTCTTCGTTCCGCCGCTAAACACCTCGGAGTCCTGCTGGAACACCTTTCAGTCCTTCATCAACGAGGCCGACCCCAGCATCTCCGACATCCGCTCCTCCTGCGGCTTCAGAACCGAGTGGATCTCCCAGGGCTGCATGAACATCACCACAAAACAACAATTCGAAGACATTGTTCCCCGCAACGCTATCCAACCCGTCCAAGATGACTGCAACCAACCCCTCGAGAACAACGCCCCCTGCGCCCTCTGCACCACCAAGCTCTCCAGCATGCTTTCCTACTTAACCGGAACAACCCAAGGTAACGTCACCGACTGCAGAGCCTATACTCAAATCTACGCCGCTTCTCTCTCTGATCAGTACGGTGTCACCGATCCCGGTACCTCCAAGTGCCTCTTCGGTCTCGATTTTTCCTCTTCCGGCTCCGGTGGTAAGCGACGAAGAACTATTGTTATTGCGGTTGTTTCCGTTTTCTGTGTGGTTTCTTTGTCTGTGTTTGCTTCCCTTTGGGCTTATTTAAGATTCAAGAAGAGGCTAGAGGTTGAGAAAAGGAAGGGTGCTGGAATATCTGAGTTAGGTTTGGGTTCTGGCTTGGATTCAATTAACCAGAGTACCACTTTGATTAGGTTCAGTTTTGATGAAATTAAAAAGGCTACCAGGAACTTCTCCAGGGATAACATTATTGGAAGTGGGGGTTATGGGAATGTTTATAAAGGGATGTTATTGGATGGTAGCCAAGTTGCTTTTAAAAGGTTTAAGAATTGTTCTGTTGCTGGGGATGCTAGCTTCACTCACGAGGTTGAGGTTATTGCGAGTGTGAGGCATGTGAATCTTGTTACCCTAAGAGGCTATTGTACTGCTACGACCAATTTGGAAGGTCACCAGAGGATTATTGTCACTGATTTGATGGAAAACGGGAGTCTTTATGATCATTTATTCGGTTCTGCTAAGAAGAATCTCACTTGGCCAATTCGTcaaaagattgctctagggaccgctagggggttggcttatttgcactatggagctcaaccttccatcatccatagggatattaaggctagtaacattcttctggaccacaattttgaagccaaggttgcggatttcgggttggcaaagttcaaccctgaggggatgactcacatgagtactagagtggctgggactatgggatatgttgctcctgagtatgctttgtatggacaattgacagagaggagtgatgtgttcagcttcggtgttgtgcttcttgagctcctgagtgggagaaaggcacttcaaaCCGATGATGATGGCCAACCCGCCGCACTCACTGACTTTGCTTGGTCGTTGGTTAGGAATGGTAGTGCTTTGGATGTTGTTGAAGATGGTATTCCAGAACCTGGTCCACCAGAAGTTCTTGAGAAGTATGTGTTGGTTGCTGTATTGTGTTCTCATCCTCAGCTATATGCTAGGCCTACAATGGATCAGGTTGTTAAGATGCTTGAGACTGATGAATCTGTGCCCTCTTTGATGGAAAGGCCAATTCCTTTTATTGCTGGGAGGCTTGATATTGAGAAATCTGCTCTGAGTAACTCGGGTCAGCTCTGTAGTCCTACTGGTTATCAAGCATATACATTACAAGCTCGACGCAAATCTAATACTAAGGAGGAAGAAGAAGAAGAAGGAAGTTCGGTGGCTGAGACTGTGACCACGGATTGA 2121 0.4158 MVEVHEKCNNNNELHLDLRSAPPYVFVQVDLLGQRLRQLLKEKEGMVVVTASGQRKQRGNAHGGYAIDDREPLSPFPSTPTCSNARASLAANNTLPCPLNITVLRVVSGGRRPSFDSGTKCHYILQALHLLQADYLRRSSLFVPPLNTSESCWNTFQSFINEADPSISDIRSSCGFRTEWISQGCMNITTKQQFEDIVPRNAIQPVQDDCNQPLENNAPCALCTTKLSSMLSYLTGTTQGNVTDCRAYTQIYAASLSDQYGVTDPGTSKCLFGLDFSSSGSGGKRRRTIVIAVVSVFCVVSLSVFASLWAYLRFKKRLEVEKRKGAGISELGLGSGLDSINQSTTLIRFSFDEIKKATRNFSRDNIIGSGGYGNVYKGMLLDGSQVAFKRFKNCSVAGDASFTHEVEVIASVRHVNLVTLRGYCTATTNLEGHQRIIVTDLMENGSLYDHLFGSAKKNLTWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDHNFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGRKALQTDDDGQPAALTDFAWSLVRNGSALDVVEDGIPEPGPPEVLEKYVLVAVLCSHPQLYARPTMDQVVKMLETDESVPSLMERPIPFIAGRLDIEKSALSNSGQLCSPTGYQAYTLQARRKSNTKEEEEEEGSSVAETVTTD 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01371 706 CDD STKc_IRAK 367 636 - -
Gma03g01371 706 Pfam SPARK 95 245 IPR043891 -
Gma03g01371 706 SMART serkin_6 361 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01371 706 ProSitePatterns Protein kinases ATP-binding region signature. 367 389 IPR017441 GO:0005524
Gma03g01371 706 Coils Coil 675 695 - -
Gma03g01371 706 MobiDBLite consensus disorder prediction 681 706 - -
Gma03g01371 706 SUPERFAMILY Protein kinase-like (PK-like) 344 647 IPR011009 -
Gma03g01371 706 PANTHER OS01G0253100 PROTEIN 96 688 IPR045271 GO:0004714|GO:0006468
Gma03g01371 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Gma03g01371 706 ProSiteProfiles Protein kinase domain profile. 361 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01371 706 Gene3D Transferase(Phosphotransferase) domain 1 442 645 - -
Gma03g01371 706 Pfam Protein tyrosine and serine/threonine kinase 364 635 IPR001245 GO:0004672|GO:0006468
Gma03g01371 706 Gene3D Phosphorylase Kinase; domain 1 335 440 - -
Gma03g01371 706 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 96 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01371 Gma-Chr3 39878984 39885952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01371 88 680 Receptor kinase-like Gene Family AT2G48010 62.081 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Gma03g01371 PK_Tyr_Ser-Thr 3.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01371 - - gmx:100786298 1193.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01437 19 43638310 43640220 Gma03g01371 03 39878984 39885952 GST