Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01370 ATGAAGGACGAGGTGGATTCCCCTTTTGGTGTTCTTGAGGACTATTTCAACTTCAAGAGTTCAGAATCAGAAACAAGCTCTTCCAAAGAACCAAGTACTATTGTGGATTCTGATAAGTTAAAACCAGGTTCTAGGTGGAATGCGTTTCTTCAATTGTTGAGGGTCAAATCGAAGCCAATAGCTACATTGCATCCTCTTAGTGTCCTCAAGCTTTCAAGAAGAATGAGCAGTAGCATGAGGGAGACTGTAATAGATGCAGATTCGTCCTTGCATAGGTCACCCTGGAAGATCTTCACTCACCATGAGATACAAATTGCAACCAATTACTTCATCCAAGAAAATTGTATTGGAAAGGGTGGTTATGCTGAGGTTTACAAAGGGTGTTTGCCAAATGGTCAGCTGGTAGCGATTAAAATGCTGACACGTGGAACAGAAAACGAAACTATAGGTGACTTCTTATCAGAACTTGGTATAATGGCTCATGTAAACCACTCCAACACTGCCAAGTTAGTTGGCTATGGGGTGGAGGGAGGAATGTATCTAGTGCTTGAGTTGTCTGAAAAAGGGTGCTTAGCTTCAATGCTTAATGGTTCCAAGGAGAAACTACCATGGTCTTTTAGGCAGAAAATAGCATTAGGAACAGCTAAGGGTATAATGTATCTTCATGAAGGTTGTCAGAGAAGAATTATCCATAGAGATATAACAGCGGCAAATATCTTGCTTACTGAGAACTTTGAGCCGCAGATTTGTGATTTCGGGCTAGCAAAATGGCTACCAGAAAATTGGACCCATCACATTGTTTCAAAAATTGAAGGGACTTTTGGTTATCTTACTCCTGAATACTTGCTTCATGGGATAGTGGATGAAAAAACAGATGTATTTGCGTTTGGTGTAGTGCTATTAGAATTAGTCACAGGGAGACGAGCACTTGATCATTCACAACAAAGCCTTGTTTTGTGGGCAAAACCTTTGCTGAAAAAGAATTGTATTAGGGAGCTGATTGATCCTTCATTAGCCGATGATTTTGACTGTCGGCAGATTAAAATTATGCTCTTGGCAGCTTCTTTATGCATTCAACAATCCTCTATTCGTCGCCCCTCTATGAAACAGGCAAGTTCTCTTGTTGTACAACTTTTGAATGGTAACCTTAGCTGCTTTAAGTTCACGAAGAAATCTCAACATCCATTGTTCCGAAAAGTCTTTCAAGAAGAGCTTCTTGACGCTGATTAA 1230 0.4033 MKDEVDSPFGVLEDYFNFKSSESETSSSKEPSTIVDSDKLKPGSRWNAFLQLLRVKSKPIATLHPLSVLKLSRRMSSSMRETVIDADSSLHRSPWKIFTHHEIQIATNYFIQENCIGKGGYAEVYKGCLPNGQLVAIKMLTRGTENETIGDFLSELGIMAHVNHSNTAKLVGYGVEGGMYLVLELSEKGCLASMLNGSKEKLPWSFRQKIALGTAKGIMYLHEGCQRRIIHRDITAANILLTENFEPQICDFGLAKWLPENWTHHIVSKIEGTFGYLTPEYLLHGIVDEKTDVFAFGVVLLELVTGRRALDHSQQSLVLWAKPLLKKNCIRELIDPSLADDFDCRQIKIMLLAASLCIQQSSIRRPSMKQASSLVVQLLNGNLSCFKFTKKSQHPLFRKVFQEELLDAD 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01370 409 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
Gma03g01370 409 Pfam Protein tyrosine and serine/threonine kinase 113 318 IPR001245 GO:0004672|GO:0006468
Gma03g01370 409 ProSiteProfiles Protein kinase domain profile. 110 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01370 409 ProSitePatterns Tyrosine protein kinases specific active-site signature. 229 241 IPR008266 GO:0004672|GO:0006468
Gma03g01370 409 SUPERFAMILY Protein kinase-like (PK-like) 90 372 IPR011009 -
Gma03g01370 409 PANTHER OS08G0249100 PROTEIN 1 408 - -
Gma03g01370 409 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 408 - -
Gma03g01370 409 Gene3D Transferase(Phosphotransferase) domain 1 187 392 - -
Gma03g01370 409 Gene3D Phosphorylase Kinase; domain 1 81 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01370 Gma-Chr3 39872119 39874639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01370 97 374 Trihelix Transcription Factor Family AT1G68690 41.115 3.32e-66 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma03g01370 PK_Tyr_Ser-Thr 3.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01370 - - gmx:100787372 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01370 03 39872119 39874639 Gma03g02223 03 47556379 47566552 ECH
Gma03g01370 03 39872119 39874639 Gma10g01549 10 42566487 42577405 ECH
Gma03g01370 03 39872119 39874639 Gma03g01370 03 39872119 39874639 ECH
Gma03g01370 03 39872119 39874639 Gma19g01436 19 43631927 43634815 ECH
Gma15g00942 15 7859179 7862732 Gma03g01370 03 39872119 39874639 ECH
Gma19g01436 19 43631927 43634815 Gma03g01370 03 39872119 39874639 GST
Gma03g01370 03 39872119 39874639 Gma10g00224 10 2060473 2064206 PCT
Gma03g01370 03 39872119 39874639 Gma02g01373 02 15903121 15906859 PCT
Gma10g00224 10 2060473 2064206 Gma03g01370 03 39872119 39874639 PCT
Gma02g01373 02 15903121 15906859 Gma03g01370 03 39872119 39874639 PCT