Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01354 ATGGACAACACTGAGAAAGAGACCCACGACTTCATGAACGTCGATTCTTTCTCCCAGCTCCCCTTCCTCCGCCCCGCACCACCCTCCAAAGACAAAGCCGCCATTCGCCTCTTCGGCCATGAATTCGGCGACGCGCACCACTCTAACCCTACCCACAACTCATTTATTATCTCCAACAACAACGTTAGCGCCTCCGAACATACCACCAACAAAGACGTCAACAACAACGTAGAAAACGGCGAGAGCAGCCGCAGATTCGAGTGCCATTATTGTTGCAGAAACTTCCCCACTTCCCAGGCCTTAGGCGGGCACCAAAACGCGCACAAACGAGAGCGCCAGCACGCGAAACGACACCTTCAAAGTACCCTGATCTCCGATGCAAACGCGTATAGCTTCATGAACTACAGGTTCGGTTCCACGGCAATGTCTAATTACTCTTACTCTTCTTATCCAACGTGGAACAGTTCCAACTCGTCAAGCGCTATGCTTGGGAACACTGGTGGAACTGGAAGGTTCTACGGAAACTCCTATTCTCAGCAACTTCAAACTATCAATGGAAGCCCTTTGGGTTTGTGGCGAATCCCCACCGCCACTAATAGTACTCATTCCCAAAGTAACCCTATTTTCAACCGCGAACGCTCGTTGCAACCTTTGCCTTTGTTTTCTGGCGAGGAAATGGTGAACGCGAGGATCGGGCACTCTGGTTCGCAGAACCGGTTTGGTAATTATGGTTCCAAGCCCAGCGTAAACGACCATGTGAGTTTGGATCTTCATCTGTAA 780 0.5051 MDNTEKETHDFMNVDSFSQLPFLRPAPPSKDKAAIRLFGHEFGDAHHSNPTHNSFIISNNNVSASEHTTNKDVNNNVENGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRHLQSTLISDANAYSFMNYRFGSTAMSNYSYSSYPTWNSSNSSSAMLGNTGGTGRFYGNSYSQQLQTINGSPLGLWRIPTATNSTHSQSNPIFNRERSLQPLPLFSGEEMVNARIGHSGSQNRFGNYGSKPSVNDHVSLDLHL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01354 259 PANTHER ZINC FINGER PROTEIN GIS 1 259 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Gma03g01354 259 PANTHER ZINC FINGER PROTEIN GIS 1 259 - -
Gma03g01354 259 Pfam C2H2-type zinc finger 85 110 - -
Gma03g01354 259 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 113 IPR013087 -
Gma03g01354 259 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Gma03g01354 259 SUPERFAMILY beta-beta-alpha zinc fingers 83 114 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01354 Gma-Chr3 39722546 39723325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01354 1 259 C2H2 Transcription Factor Family AT2G41940 40.210 5.64e-46 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01354 - - gmx:100788954 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01354 03 39722546 39723325 Gma03g01354 03 39722546 39723325 ECH
Gma19g01418 19 43478130 43479010 Gma03g01354 03 39722546 39723325 GST