Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01336 ATGAGGATCCGGAAAAGGCCGGCGCTTTTCCCTTCTTCGCTCTCGCCGCTGCGTCTCTCAGATCCCCACCTGATCAACCGGTCACCGGTGGTGGTGCAACTAAGCGACGCTACTTCCACCGCACCGAAACTCTCTTTTTCTTCTTCTGCACACCATGCTGCTTTCGCGCATCCTTCGACCTTGGATCGTTTCCAGCCGTCTGATCAGCCTCTCCCTTTGATCGGGAAACAAAGCAACGGCTCGGATGATCCCTCCGGCATCGGTGAAAGTGGGGCACACAGACAGCACAACAAGCAAGACCCTTTGGACGAGGTTGTTAGAAGAGAAGAGAGTGGAGAAGACTCGGGAGAGAAGGGTAACCATATCAGGAAAGGACGCACCTTTGGTTCGGAAAAAACACAAGCTGAGTTGTTGCCACCGTTAAGCTCATCTTCTACTCAAGATGGGAGATGGTACGAGGGAGAGAAAGCGATTCCGCTGAAGAAAAGGAGAGGGAACTTCGAGGAGAATAATAATAATAATAATGCTGCTGCTCATAGCAAGAAGATgatgaaggcgaagatgaagacgaagatgaaCAAGAAGTGTTCAACGCCGCGCAACAACGAGGATAGCACGGGAGAGGAAGAAGTGAAGAAGAAGGTAGAAGAAACAATAAAAGTGGAAGTGAATGTTGTGAGTAAAAAGAGAGCAAGGGGTAGTGCACTCATGGAAGGTTCTAGGTGCAGTCGTGTGAATGGGAGAGGATGGAGGTGCTGCCAGCAAACGCTGGTTGGTTACTCGCTGTGTGAGCATCACTTGGGGAAGGGAAGACTCAGAAGCATGACAAGTGTTAGAAGCCGTTCCATTATTGCATCAACTGCACCAAAGGAGGTGCACGTGCACCACGTGCCTCACCCTTCTTCTTCTTCCCCTTCTTTTTGTTCTCTCGAGAAGCAAATTGAGTGTGTTGATGATGCTGAGCCCTTTGGGGAGAAGGAGGAGAAGAAACCAGGGATAATAATGACGTCGACGAAGAAGAGGATGAAGCTTGGCATGGTGAAAGCGCGTTCCATAAGCAGTTTGCTGGGGCAAACAAGCAACCACATTGCTGCTGTAGCTCATGAGAATAGCAAGAAACTAGTTTTATGCTGTTCGATTGAGAAGCTCCTATTCTGTGTGTGTTATCTCTGTGTTTCAGAGCATACGCGTGCATTGCATGTTGGTCACTGTTCTTGA 1218 0.4803 MRIRKRPALFPSSLSPLRLSDPHLINRSPVVVQLSDATSTAPKLSFSSSAHHAAFAHPSTLDRFQPSDQPLPLIGKQSNGSDDPSGIGESGAHRQHNKQDPLDEVVRREESGEDSGEKGNHIRKGRTFGSEKTQAELLPPLSSSSTQDGRWYEGEKAIPLKKRRGNFEENNNNNNAAAHSKKMMKAKMKTKMNKKCSTPRNNEDSTGEEEVKKKVEETIKVEVNVVSKKRARGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIIASTAPKEVHVHHVPHPSSSSPSFCSLEKQIECVDDAEPFGEKEEKKPGIIMTSTKKRMKLGMVKARSISSLLGQTSNHIAAVAHENSKKLVLCCSIEKLLFCVCYLCVSEHTRALHVGHCS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01336 405 Pfam WRC 238 278 IPR014977 -
Gma03g01336 405 PANTHER - 41 372 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gma03g01336 405 MobiDBLite consensus disorder prediction 196 210 - -
Gma03g01336 405 ProSiteProfiles WRC domain profile. 236 280 IPR014977 -
Gma03g01336 405 PANTHER OS02G0773600 PROTEIN 41 372 - -
Gma03g01336 405 MobiDBLite consensus disorder prediction 62 85 - -
Gma03g01336 405 MobiDBLite consensus disorder prediction 191 210 - -
Gma03g01336 405 MobiDBLite consensus disorder prediction 60 149 - -
Gma03g01336 405 MobiDBLite consensus disorder prediction 93 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01336 Gma-Chr3 39521744 39526534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01336 233 287 GRF Transcription Factor Family AT2G36400 36.842 7.87e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01336 - - gmx:100781689 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01336 03 39521744 39526534 Gma03g01336 03 39521744 39526534 ECH
Gma19g01401 19 43274977 43277413 Gma03g01336 03 39521744 39526534 GST
Gma03g01336 03 39521744 39526534 Gma02g01589 02 32284772 32287310 PCT
Gma02g01589 02 32284772 32287310 Gma03g01336 03 39521744 39526534 PCT