Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01312 ATGATTAGCGACTTCCTCTCAGTGCTTCTTAACCTCTCTGTCTTCTCGTCACTTTTGATTTCTCAGAGCTTAGCGTTCACGCATCCACCTGAAGTGTTAGCTCTTCAGGATCTATACAGAACCTTTAACTACCCACCAATGCTCAAAGGATGGAATGGTACCGATCCTTGTGGGGAGTCTTGGACAGGAGTTGCTTGTTCTGGACCATCAGTCATACAGCTAAGACTTCAAGGATTAAACCTCACTGGGTATCTTGGAAGTCTTTTATATAATCTACCTAACTTGAAGCAACTTGATGTCAGTTCGAATAAGATCCTGGGCGAAATACCATTCGGTCTACCCCCCAATGTCTCACATATGAATTTAAGCCACAATTTATTACATGGACCCATTGGTGATGTATTTACTGGTTTAGATAATCTCAGAGAAATGGACCTTTCATACAATAATTTCTCAGGAGATCTGCCGTTCTCATTTGGTTCCTTAAGAAACCTTGCCAGATTGTTCCTGCAGAATAACAGATTCACTGGATCAGTTACTTACTTGGCTGAACTTCCACTCACAGATTTGAACATTCAAGATAATCTGTTTAGTGGCATTCTTCCACAGCACTTTCAATCCATACTGAATTTATGGATTGGCGAGAATAAATTCTATGAGGCGGACAACTCTCCTCCCTGGAGTTTTCCTCTGGATACTGTATCAGTTGAGCATAACACTAGTAGCCCACCCACAACTCAGGCAAATGCTATAAAGAATTATTCCcctcccagagtaagtgaggctcctcccagagtaagtgaggatcttcccagagtaaatgaggctcctctcagagtaagtgagCACAAGAAGAAACGTATAGGTCCTGGAGGAATAGCATGTATGATTGGTGGAGGAACACTGATGGCCACCGGAGTGGCGCTCTTTGTTGCAACCCGATTGAATAAATGTCGTGAAGAGAGCCCGAACTCGAAAAGCTCAGAAAGCAACCATGGCTCATTGCATTCTCATCCGATCAGTGAAGCCATAGGGATCACTTCTAACGCACTAGAGGAGAGGCAGAGTCCACAAGTCCCCCCCATTAATTCCGCATCCCTTTTGGGCCCTGTGGGATTGCCTTCCCTGAACCATAACAATACAGAGGAACCATTAAGAAGAAGTTTTTCCAAAAGAAGCAGATTCACTGGAAGGACGAAAGTTTACACAGTAGAGGAGCTTCAGTTGGCTACTAATTGCTTCAATGAAGCCAATGTTCTTGGAGAGGGATCTCTTGGCCCTGTTTATAGAGCTAAATTTCCAGATGGCAAAATTTTGGCCGTGAAGAAGATAAACATGGCGGGCATGTCCTTCAGAGAAGAGGTAAAGTTCTTGGATATTATTGGCACGATTTCCAGACTGAAGCACCCCAACATAGTAGCACTCAATGGTTACTGTTTGGAGCATGGAAAGCATCTTCTTGTTTACGATTACGTTAGAAATTTCACTCTGAACGATGCTCTTCACAATGAGGCATACAAATCTCTGCCGTGGGTCCACCGTCTCCGGATTGCTCTAGGTGTTGCTCAGGCTCTGGACTATTTGCATGCAACGTTCTGCCCTCCCGTGGCACACGGAAACTTGAAGGCTGTCAATGTTCTACTCGATGAAAATTTGATGCCTCGTGTTTGTGACTGTTGCTTGGCTATTTTGAAACCACTGATCAGCAATCAAGTCGAAATTCCGGCTGATGAGATTAATATTGGAGAGATAGTCTGCGTTACACCGGATCATGGCCAAGCAGGAACCAGCAGCAGAAAGAGAGACGTTTTTGCCTTTGGGGTATTGCTTCTGGAACTGTTAACAGGAAGAAAACCTTTCGATGGAGCCAGGCCAAGGGACGAACAATATCTGGTGAAATGGGCTCCACCCTTGCTTCCTTACAGAGCAAGTTTGGAACAGCTGGTAGATCCCCGTATGGAAAGAACATTTTCATCCAAGGCTCTTTCTCGTTATGCTGATATCATCTCCCTCTGCATACAGCCTGTAAAGCAACTACGTCCTCCAATGTCCGAAGTTGTGGAGTCTCTTGAAGCTTTATACCAAAAGTTCAACATTGAAAAGAGCGATGTAGCAGATGGCACTGAAGTGGATCCATTTGAGAGGGTTTTCAATCTGATTTCCTCTTTTAAAGTAGCACACGCCCTCGATCTGAATTGTGCCGAGAAAATCATGGTGGACGCAGCAGAACGTAGATACTTGGAGGATGATGATTCATCTCTCATGAAAACTATCAAGGGCGCAACAACTGGTTTAGTGGCTGGAACTATCTGGGGTACTGTAGTTGCCACCTGGTATGATGTCCCCCGTGTCGAGAGAAATGTTGCTCTTCCAGGGCTGATTAGGACTATCAGGATGATGGGCAACTATGGTTTGACCTTTGCTGCCATAGGAGGAGTCTACATAGGTGTAGAGCAGTTGGTGCAGAACTATAGGATGAAGAGGGATTTAGTCAATGGAGCTGTTGGCGGATTTGTTGCAGGTGCAACTATTCTGGGTTACAGAGGAAGGAGCATCAAAACTGCACTTTCTGCTGGATCAGCATTGGCATTCACATCTGCATTCCTTGATTTCGGTGATCAGACATTAAAACATGATGCTGGGAAGGAGTATGCGGCTTACACCACAAAGAAAAGACCCAGTACTGATGCATAA 2694 0.4321 MISDFLSVLLNLSVFSSLLISQSLAFTHPPEVLALQDLYRTFNYPPMLKGWNGTDPCGESWTGVACSGPSVIQLRLQGLNLTGYLGSLLYNLPNLKQLDVSSNKILGEIPFGLPPNVSHMNLSHNLLHGPIGDVFTGLDNLREMDLSYNNFSGDLPFSFGSLRNLARLFLQNNRFTGSVTYLAELPLTDLNIQDNLFSGILPQHFQSILNLWIGENKFYEADNSPPWSFPLDTVSVEHNTSSPPTTQANAIKNYSPPRVSEAPPRVSEDLPRVNEAPLRVSEHKKKRIGPGGIACMIGGGTLMATGVALFVATRLNKCREESPNSKSSESNHGSLHSHPISEAIGITSNALEERQSPQVPPINSASLLGPVGLPSLNHNNTEEPLRRSFSKRSRFTGRTKVYTVEELQLATNCFNEANVLGEGSLGPVYRAKFPDGKILAVKKINMAGMSFREEVKFLDIIGTISRLKHPNIVALNGYCLEHGKHLLVYDYVRNFTLNDALHNEAYKSLPWVHRLRIALGVAQALDYLHATFCPPVAHGNLKAVNVLLDENLMPRVCDCCLAILKPLISNQVEIPADEINIGEIVCVTPDHGQAGTSSRKRDVFAFGVLLLELLTGRKPFDGARPRDEQYLVKWAPPLLPYRASLEQLVDPRMERTFSSKALSRYADIISLCIQPVKQLRPPMSEVVESLEALYQKFNIEKSDVADGTEVDPFERVFNLISSFKVAHALDLNCAEKIMVDAAERRYLEDDDSSLMKTIKGATTGLVAGTIWGTVVATWYDVPRVERNVALPGLIRTIRMMGNYGLTFAAIGGVYIGVEQLVQNYRMKRDLVNGAVGGFVAGATILGYRGRSIKTALSAGSALAFTSAFLDFGDQTLKHDAGKEYAAYTTKKRPSTDA 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01312 897 MobiDBLite consensus disorder prediction 237 285 - -
Gma03g01312 897 ProSiteProfiles Protein kinase domain profile. 414 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01312 897 Gene3D Transferase(Phosphotransferase) domain 1 493 713 - -
Gma03g01312 897 PANTHER OS01G0253100 PROTEIN 2 712 IPR045271 GO:0004714|GO:0006468
Gma03g01312 897 SUPERFAMILY L domain-like 28 213 - -
Gma03g01312 897 Pfam Tim17/Tim22/Tim23/Pmp24 family 756 864 - -
Gma03g01312 897 Pfam Leucine rich repeat 115 175 IPR001611 GO:0005515
Gma03g01312 897 SUPERFAMILY Protein kinase-like (PK-like) 392 691 IPR011009 -
Gma03g01312 897 Pfam Protein tyrosine and serine/threonine kinase 418 690 IPR001245 GO:0004672|GO:0006468
Gma03g01312 897 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Gma03g01312 897 MobiDBLite consensus disorder prediction 237 254 - -
Gma03g01312 897 Gene3D Ribonuclease Inhibitor 27 255 IPR032675 -
Gma03g01312 897 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 2 712 - -
Gma03g01312 897 Gene3D Phosphorylase Kinase; domain 1 377 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01312 Gma-Chr3 39298462 39309125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01312 5 717 Strubbelig Receptor Gene Family AT5G06820 48.322 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gma03g01312 PK_Tyr_Ser-Thr 1.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01312 - - gmx:100775254 1414.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01312 03 39298462 39309125 Gma03g01312 03 39298462 39309125 ECH