Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01311 ATGGCAGGAACTGCTTTCTCCACCTCCTGTCTTTCCTCTTCTAGCAACTTAGGGACATGTTGGTTGGTATTAAAAACTCACAATGCAAGGGCCGTGCCAGGGAAACTACTACCTGGAAATGGAAGGAGAAGAATGGCATTAATAAAAGCAGAAGTGAAGTATGTGAACGCTGAAAAAGCTAAGGAACTTGTGGAAGCTGATGGATATACGGTTCTTGATGTGCGGGACAAAAATCAGTTTGAGCGAGCTCACATCAAATCTTGTTCTCATGTGCCTCTTTTTGTTGAAAACAAAGACAATGATCCCGGTACTATTATAAAAAGGCAGCTGCACAATAATTTTTCTGGGTTGTTCTATGGGTTACCATTCACTAAGCCAAATCCTGAATTTGTACAATCTGTTAAGAGCCAGTTTCCCCCTGAAAGTAAACTCTTGGTTGTATGTCAGGAAGGACTGAGGTCTGCTGCAGCAGCAAGTAAGTTAGAAGCAGCTGGTTTCGAAAATATAGCATGCATAACATCTGGCCTTCAAACTGTAAAACCAGGAACTTTTGATTCTGTTGGGTCCACCGAGTTGGAGAATGCTGGCAAAGCTGGCTTGGTGACAATCCAAGGAAAAATCTCAACTGTGTTGGGAACTATTCTTGTTTGTGCATATTTATTCATTACCTTCTTTCCCGACCAAGCAGAGAAGCTATTCCAATTGGTCCCTACAGGCTAA 720 0.4222 MAGTAFSTSCLSSSSNLGTCWLVLKTHNARAVPGKLLPGNGRRRMALIKAEVKYVNAEKAKELVEADGYTVLDVRDKNQFERAHIKSCSHVPLFVENKDNDPGTIIKRQLHNNFSGLFYGLPFTKPNPEFVQSVKSQFPPESKLLVVCQEGLRSAAAASKLEAAGFENIACITSGLQTVKPGTFDSVGSTELENAGKAGLVTIQGKISTVLGTILVCAYLFITFFPDQAEKLFQLVPTG 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01311 239 Pfam Rhodanese-like domain 57 177 IPR001763 -
Gma03g01311 239 Coils Coil 47 67 - -
Gma03g01311 239 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 42 177 IPR036873 -
Gma03g01311 239 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 238 IPR044615 -
Gma03g01311 239 Gene3D - 42 184 IPR036873 -
Gma03g01311 239 CDD RHOD 60 180 - -
Gma03g01311 239 ProSiteProfiles Rhodanese domain profile. 65 188 IPR001763 -
Gma03g01311 239 SMART rhod_4 55 185 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01311 Gma-Chr3 39293546 39296962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01311 7 233 Sulfurtransferasese or Rhodanese AT2G42220 68.722 2.53e-114 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01311 - - gmx:100500055 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01311 03 39293546 39296962 Gma03g01311 03 39293546 39296962 ECH
Gma19g01375 19 43038699 43042766 Gma03g01311 03 39293546 39296962 GST