Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01296 ATGGACAAGGCAAATAATTCTTTAAACATGTACAACCATTGGAGCGGCAATGACTATACTACTGAAATCTTCTCCCCTTACCTTGGTGTCTACAGAAACAGGACTTTGGAGAACAGGAAATGGATAGCGAGGCTCGATCGTGAGGGTCTGCCAACCTTGCACTTAGGAATTTTTGACACTGCAGAGGATGCAGCCAGAGCTTATGATATCATATCAATAAAGTTGAATGGATGGGATGCGCTTACAAACTTCCATTTGAATTGCTATGATGTTAGGTGCATTATGGAGAGTGATTTAACTCAGACCACGGAAGGAATAGCTACATTAAGAAAAGTAGACAGCAGTGGCAGTACTGAAGGATACCCTCAACAACTGAACAATTCATCTTTTTCTGAGTTTTCTCATGGCTTCAAAAACCCTAATCTGATTCCAAGCAACCCTTATACTCTTGGTGGATTTACAGCTGGTGCCGGAAGCAGTAGCGATGGCAACTTATTTGGAGGAGAGTTTCCAAATATGAGTGCTATACTGCAGCAATCACTTCAGCCTCAGAGCCAAGTGAATTTTAACAATGTTTTCAATAATCAGAACCTTTTCATCAACACCACCAACAACAACATCAACCAGTTTCTGCCTCAGAGTTCTAACTTTACAGCTGGTGCTGGAAGTAGTAGTACTGCCAATTTCAATCCAATTGGAGGAGAGTTTCCAAATCAGAGTGCTACATTGCAACAGCCACTTCAGACTCCGAGCCAAGAGAATGTTAATACTGTTTTCAATCAGAGTATTCTGAACGACGGCGACGAGGATAACAACAACAACAGACAGTTTCTGGCTCTGATTTCTAACTTTCCTTTGCTTGCTCGTGGCACCAAAAATCTTGATTTAGAAAGCTGTCTCCGTTTCACCAATTGGCCAGCTGAGTTTGGAAAAAAGTTGCTAGGTGGGAACTTGGAATTGGATTTGGAACCTTCTTCAAGCAATCTGAACGTGCCATCTCCAACACATGACATGGTGAATGAAACTGCAGAAGCTGCAAATGCTGTTGGTTCACTTGGGCAACAGATCCAACCAGTGGAACCATCTAATCAGGAATTTGGAGCCACACAGCCACAGTTACCTGCACTGAACCAAAGTCTTGAACCTGATCACAACTACAATGCCAATATTTTGAACCAGATACCACCTCAAAACTTAAACCCCAGCTTCTCTGATACTTTTCAGATTAATCCTAGTTCTGAACCAAACAACATTATTGGTCCCCAAAGTCAGACCGATGTAAGTCAATTTGATTTTGACATGAGAGAATATATCAACATATTAGAAGACGATAATTTCAGCTACGATTTTGACATGTTTGCAGCAAGGAATGAGGATAGGCAAGGCCCCTAA 1392 0.4167 MDKANNSLNMYNHWSGNDYTTEIFSPYLGVYRNRTLENRKWIARLDREGLPTLHLGIFDTAEDAARAYDIISIKLNGWDALTNFHLNCYDVRCIMESDLTQTTEGIATLRKVDSSGSTEGYPQQLNNSSFSEFSHGFKNPNLIPSNPYTLGGFTAGAGSSSDGNLFGGEFPNMSAILQQSLQPQSQVNFNNVFNNQNLFINTTNNNINQFLPQSSNFTAGAGSSSTANFNPIGGEFPNQSATLQQPLQTPSQENVNTVFNQSILNDGDEDNNNNRQFLALISNFPLLARGTKNLDLESCLRFTNWPAEFGKKLLGGNLELDLEPSSSNLNVPSPTHDMVNETAEAANAVGSLGQQIQPVEPSNQEFGATQPQLPALNQSLEPDHNYNANILNQIPPQNLNPSFSDTFQINPSSEPNNIIGPQSQTDVSQFDFDMREYINILEDDNFSYDFDMFAARNEDRQGP 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01296 463 ProSiteProfiles AP2/ERF domain profile. 26 85 IPR001471 GO:0003700|GO:0006355
Gma03g01296 463 SUPERFAMILY DNA-binding domain 26 86 IPR016177 GO:0003677
Gma03g01296 463 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL7 25 211 - -
Gma03g01296 463 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 25 211 - -
Gma03g01296 463 Gene3D AP2/ERF domain 26 87 IPR036955 GO:0003700|GO:0006355
Gma03g01296 463 SMART rav1_2 26 91 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01296 Gma-Chr3 39109119 39111448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01296 25 111 AP2-EREBP Transcription Factor Family AT1G51190 44.318 1.46e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01296 - K09285 pvu:PHAVU_001G137500g 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01351 19 42811184 42814553 Gma03g01296 03 39109119 39111448 GST