Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma03g01295 | ATGGCTACTACCACATTCTGTACATACCTATTCCTTCTTCTCTCTGTGTACCTCTCAATCTTCATAAATCTTAGTTCATCTTCATCAGAGGGTGATATTCTTCTCTCCTTCAAGGCCTCCATTGAAGACTCCAAGAAGGCCTTGTCAAGCTGGTTCAACACTTCCTCAAACCACCACTGTAACTGGACTGGAATCACTTGCTCCACCACACCTTCACTCTCAGTAACTTCTATCAACCTTCAAAGCCTAAACCTTTCTGGAGATATCTCATCTTCAATATGTGACCTTCCAAATCTGTCTTATCTCAACCTTGCTGACAACATCTTCAACCAACCCATCCCTCTTCATCTCTCTCAGTGTAGTTCTTTGGAGACTTTGAATCTCAGCACCAACCTCATATGGGGCACTATCCCTTCTCAGATTTCTCAGTTTGGTTCATTGAAAGTGCTTGATTTGAGCAGAAACCACATAGAGGGAAACATTCCTGAAAGCATAGGCTCCTTGAAGAACCTCCAAGTTCTCAACTTGGGAAGCAACTTGCTTTCAGGTAGTGTACCTGCTGTCTTTGGAAATCTAACCAAACTTGAGGTTCTTGATTTGTCTCAGAATCCATACTTGGTGAGTGAGATTCCTGAGGACATTGGTGAGCTTGGAAATCTAAAGCAACTTCTGTTGCAAAGCTCTTCTTTTCAAGGTGGAATTCCAGAATCTCTGGTGGGCCTTGTCAGCTTGACCCATTTGGATCTCTCTGAGAACAACCTAACAGGTGGGGTTACAAAGGCTCTACTACCATCTTCTCTCAAGAACCTGGTTTCATTGGATGTTTCACAAAACAAGCTTTTGGGGCCATTTCCAAGTGGCATATGCAAGGGACAAGGCCTTATTATTAACCTCAGTCTCCACACAAATGCCTTCACTGGTTCAATACCTAATTCCATTGGTGAATGTAAGAGCCTTGAGAGGTTCCAAGTCCAGAACAATGGTTTCTCTGGTGATTTCCCCATTGGATTGTGGTCATTACCCAAAATTAAGCTCATCAGAGCTGAAAACAACAGATTCTCAGGGAAGATACCCGAGTCAGTTTCAGGAGCTGGTCAGTTGGAGCAAGTTCAACTTGACAACAACACCTTTGCTGGTAAAATTCCTCAAGGTCTTGGCCTTGTCAAGAGCTTATACAGATTTTCTGCTTCTCTCAACCGTTTCTATGGTGAACTTCCTCCGAACTTTTGTGACTCTCCTGTTATGAGCATAGTGAATCTCTCCCACAATTCTCTTTCTGGACAAATCCCAGAGCTGAAAAAATGCAGGAAACTTGTTTCATTGTCTTTAGCTGATAACAGTCTAATAGGAGAAATACCATCTTCCCTTGCTGAGCTACCTGTGcttacttaccttgatctttcagataacaatctcactggttcaatcccACAAGGGCTTCAAAACTTGAAGCTTGCTCTTTTCAATGTGTCCTTCAATCAGCTATCAGGTAAGGTACCATACTCCTTGATTTCTGGTCTCCCTGCCTCATTTTTGGAAGGAAACCCTGGTCTTTGTGGCCCTGGATTGCCTAACTCTTGCTCTGATGACATGCCAAAACACCACATTGGTAGCACAACAACCTTAGCTTGTGCCCTCATCTCTTTAGCCTTTGTTGCTGGAACTGCCATTGTTGTTGGTGGCTTTATTTTGTATAGGAGATCTTGCAAGGGTGATCGAGTTGGCGTTTGGCGCTCGGTGTTCTTCTATCCTCTCAGGATTACTGAGCATGATCTGCTTATGGGGATGAATGAGAAGAGCTCAAGGGGAAATGGTGGGGCTTTTGGTAAAGTTTATGTTGTGAATTTGCCTAGTGGTGAACTAGTAGCTGTGAAGAAGTTGGTTAATTTTGGAAACCAGTCCTCAAAAAGTTTGAAGGCTGAGGTCAAGACTTTGGCAAAAATTAGGCACAAGAATGTTGTTAAAATTCTGGGGTTCTGCCACTCTGATGAGTCAGTATTTCTCATTTATGAGTACTTGCATGGAGGGAGCTTAGGGGATTTGATTTCTCGTCCGAATTTTCAGTTGCAGTGGGGACTTCGATTGAGAATTGCCATTGGAGTTGCTCAAGGACTGGCATATCTTCACAAGGATTATGTCCCTCACTTGCTTCACAGAAATGTCAAGTCAAGTAACATTTTGTTGGAAGCAAACTTTGAGCCAAAACTCACAGATTTCGCTCTTGATCGAGTAGTGGGAGAAGCTGCATTTCAATCAGTTTTGAACTCTGAAGCAGCATCTTCATGTTACATTGCACCAGAAAATGGTTACAGTAAGAAAGCAACTGAACAATTGGACATCTACAGCTTTGGTGTGGTATTGCTAGAGCTAGTGAGTGGCAGGAAAGCAGAGCAAACAGAGTCTAGTGACTCACTTGACATTGTGAAGTGGGTTAGAAGGAAAGTGAATATCACTAATGGGGTGCAACAAGTTCTTGACCCTAAAATCTCACACACTTGTCACCAAGAAATGATTGGAGCCTTAGACATTGCGCTTCGTTGCACTTCTGTGGTGCCTGAGAAAAGGCCATCCATGGTAGAAGTTGTAAGAGGCCTTCTGTCCTTGGAGTCAAGAACTTGCATTGCAAATTTGCATGAACCATATGAGGAACCCTCCATTCCAGTCTGA | 2667 | 0.4244 | MATTTFCTYLFLLLSVYLSIFINLSSSSSEGDILLSFKASIEDSKKALSSWFNTSSNHHCNWTGITCSTTPSLSVTSINLQSLNLSGDISSSICDLPNLSYLNLADNIFNQPIPLHLSQCSSLETLNLSTNLIWGTIPSQISQFGSLKVLDLSRNHIEGNIPESIGSLKNLQVLNLGSNLLSGSVPAVFGNLTKLEVLDLSQNPYLVSEIPEDIGELGNLKQLLLQSSSFQGGIPESLVGLVSLTHLDLSENNLTGGVTKALLPSSLKNLVSLDVSQNKLLGPFPSGICKGQGLIINLSLHTNAFTGSIPNSIGECKSLERFQVQNNGFSGDFPIGLWSLPKIKLIRAENNRFSGKIPESVSGAGQLEQVQLDNNTFAGKIPQGLGLVKSLYRFSASLNRFYGELPPNFCDSPVMSIVNLSHNSLSGQIPELKKCRKLVSLSLADNSLIGEIPSSLAELPVLTYLDLSDNNLTGSIPQGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLEGNPGLCGPGLPNSCSDDMPKHHIGSTTTLACALISLAFVAGTAIVVGGFILYRRSCKGDRVGVWRSVFFYPLRITEHDLLMGMNEKSSRGNGGAFGKVYVVNLPSGELVAVKKLVNFGNQSSKSLKAEVKTLAKIRHKNVVKILGFCHSDESVFLIYEYLHGGSLGDLISRPNFQLQWGLRLRIAIGVAQGLAYLHKDYVPHLLHRNVKSSNILLEANFEPKLTDFALDRVVGEAAFQSVLNSEAASSCYIAPENGYSKKATEQLDIYSFGVVLLELVSGRKAEQTESSDSLDIVKWVRRKVNITNGVQQVLDPKISHTCHQEMIGALDIALRCTSVVPEKRPSMVEVVRGLLSLESRTCIANLHEPYEEPSIPV | 888 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma03g01295 | 888 | Pfam | Leucine rich repeat | 146 | 204 | IPR001611 | GO:0005515 | |
Gma03g01295 | 888 | PANTHER | - | 5 | 874 | - | - | |
Gma03g01295 | 888 | ProSiteProfiles | Leucine-rich repeat profile. | 461 | 484 | IPR001611 | GO:0005515 | |
Gma03g01295 | 888 | Pfam | Leucine Rich repeat | 243 | 256 | IPR001611 | GO:0005515 | |
Gma03g01295 | 888 | Pfam | Protein kinase domain | 606 | 862 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma03g01295 | 888 | SUPERFAMILY | Protein kinase-like (PK-like) | 605 | 864 | IPR011009 | - | |
Gma03g01295 | 888 | Gene3D | Transferase(Phosphotransferase) domain 1 | 673 | 879 | - | - | |
Gma03g01295 | 888 | ProSiteProfiles | Leucine-rich repeat profile. | 146 | 168 | IPR001611 | GO:0005515 | |
Gma03g01295 | 888 | PRINTS | Leucine-rich repeat signature | 244 | 257 | - | - | |
Gma03g01295 | 888 | PRINTS | Leucine-rich repeat signature | 267 | 280 | - | - | |
Gma03g01295 | 888 | Pfam | Leucine rich repeat N-terminal domain | 28 | 68 | IPR013210 | - | |
Gma03g01295 | 888 | Pfam | Leucine Rich Repeat | 462 | 483 | IPR001611 | GO:0005515 | |
Gma03g01295 | 888 | SUPERFAMILY | L domain-like | 209 | 523 | - | - | |
Gma03g01295 | 888 | ProSiteProfiles | Protein kinase domain profile. | 597 | 881 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma03g01295 | 888 | SMART | LRR_typ_2 | 459 | 482 | IPR003591 | - | |
Gma03g01295 | 888 | SMART | LRR_typ_2 | 168 | 191 | IPR003591 | - | |
Gma03g01295 | 888 | SMART | LRR_typ_2 | 267 | 291 | IPR003591 | - | |
Gma03g01295 | 888 | SMART | LRR_typ_2 | 144 | 167 | IPR003591 | - | |
Gma03g01295 | 888 | SMART | LRR_typ_2 | 96 | 120 | IPR003591 | - | |
Gma03g01295 | 888 | SMART | LRR_typ_2 | 241 | 264 | IPR003591 | - | |
Gma03g01295 | 888 | SMART | LRR_typ_2 | 192 | 217 | IPR003591 | - | |
Gma03g01295 | 888 | Gene3D | Ribonuclease Inhibitor | 208 | 262 | IPR032675 | - | |
Gma03g01295 | 888 | Gene3D | Ribonuclease Inhibitor | 263 | 530 | IPR032675 | - | |
Gma03g01295 | 888 | Gene3D | Phosphorylase Kinase; domain 1 | 591 | 672 | - | - | |
Gma03g01295 | 888 | SUPERFAMILY | L domain-like | 28 | 290 | - | - | |
Gma03g01295 | 888 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 5 | 874 | - | - | |
Gma03g01295 | 888 | Gene3D | Ribonuclease Inhibitor | 26 | 207 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma03g01295 | Gma-Chr3 | 39092113 | 39095336 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma03g01295 | 34 | 863 | Receptor kinase-like Gene Family | AT5G06940 | 66.228 | 0.0 | 1088 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Gma03g01295 | Pkinase | 1.9e-38 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma03g01295 | - | - | gmx:100794428 | 1599.33 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma03g01295 | 03 | 39092113 | 39095336 | Gma03g01295 | 03 | 39092113 | 39095336 | ECH | |
Gma19g01350 | 19 | 42802242 | 42805617 | Gma03g01295 | 03 | 39092113 | 39095336 | GST |