Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01295 ATGGCTACTACCACATTCTGTACATACCTATTCCTTCTTCTCTCTGTGTACCTCTCAATCTTCATAAATCTTAGTTCATCTTCATCAGAGGGTGATATTCTTCTCTCCTTCAAGGCCTCCATTGAAGACTCCAAGAAGGCCTTGTCAAGCTGGTTCAACACTTCCTCAAACCACCACTGTAACTGGACTGGAATCACTTGCTCCACCACACCTTCACTCTCAGTAACTTCTATCAACCTTCAAAGCCTAAACCTTTCTGGAGATATCTCATCTTCAATATGTGACCTTCCAAATCTGTCTTATCTCAACCTTGCTGACAACATCTTCAACCAACCCATCCCTCTTCATCTCTCTCAGTGTAGTTCTTTGGAGACTTTGAATCTCAGCACCAACCTCATATGGGGCACTATCCCTTCTCAGATTTCTCAGTTTGGTTCATTGAAAGTGCTTGATTTGAGCAGAAACCACATAGAGGGAAACATTCCTGAAAGCATAGGCTCCTTGAAGAACCTCCAAGTTCTCAACTTGGGAAGCAACTTGCTTTCAGGTAGTGTACCTGCTGTCTTTGGAAATCTAACCAAACTTGAGGTTCTTGATTTGTCTCAGAATCCATACTTGGTGAGTGAGATTCCTGAGGACATTGGTGAGCTTGGAAATCTAAAGCAACTTCTGTTGCAAAGCTCTTCTTTTCAAGGTGGAATTCCAGAATCTCTGGTGGGCCTTGTCAGCTTGACCCATTTGGATCTCTCTGAGAACAACCTAACAGGTGGGGTTACAAAGGCTCTACTACCATCTTCTCTCAAGAACCTGGTTTCATTGGATGTTTCACAAAACAAGCTTTTGGGGCCATTTCCAAGTGGCATATGCAAGGGACAAGGCCTTATTATTAACCTCAGTCTCCACACAAATGCCTTCACTGGTTCAATACCTAATTCCATTGGTGAATGTAAGAGCCTTGAGAGGTTCCAAGTCCAGAACAATGGTTTCTCTGGTGATTTCCCCATTGGATTGTGGTCATTACCCAAAATTAAGCTCATCAGAGCTGAAAACAACAGATTCTCAGGGAAGATACCCGAGTCAGTTTCAGGAGCTGGTCAGTTGGAGCAAGTTCAACTTGACAACAACACCTTTGCTGGTAAAATTCCTCAAGGTCTTGGCCTTGTCAAGAGCTTATACAGATTTTCTGCTTCTCTCAACCGTTTCTATGGTGAACTTCCTCCGAACTTTTGTGACTCTCCTGTTATGAGCATAGTGAATCTCTCCCACAATTCTCTTTCTGGACAAATCCCAGAGCTGAAAAAATGCAGGAAACTTGTTTCATTGTCTTTAGCTGATAACAGTCTAATAGGAGAAATACCATCTTCCCTTGCTGAGCTACCTGTGcttacttaccttgatctttcagataacaatctcactggttcaatcccACAAGGGCTTCAAAACTTGAAGCTTGCTCTTTTCAATGTGTCCTTCAATCAGCTATCAGGTAAGGTACCATACTCCTTGATTTCTGGTCTCCCTGCCTCATTTTTGGAAGGAAACCCTGGTCTTTGTGGCCCTGGATTGCCTAACTCTTGCTCTGATGACATGCCAAAACACCACATTGGTAGCACAACAACCTTAGCTTGTGCCCTCATCTCTTTAGCCTTTGTTGCTGGAACTGCCATTGTTGTTGGTGGCTTTATTTTGTATAGGAGATCTTGCAAGGGTGATCGAGTTGGCGTTTGGCGCTCGGTGTTCTTCTATCCTCTCAGGATTACTGAGCATGATCTGCTTATGGGGATGAATGAGAAGAGCTCAAGGGGAAATGGTGGGGCTTTTGGTAAAGTTTATGTTGTGAATTTGCCTAGTGGTGAACTAGTAGCTGTGAAGAAGTTGGTTAATTTTGGAAACCAGTCCTCAAAAAGTTTGAAGGCTGAGGTCAAGACTTTGGCAAAAATTAGGCACAAGAATGTTGTTAAAATTCTGGGGTTCTGCCACTCTGATGAGTCAGTATTTCTCATTTATGAGTACTTGCATGGAGGGAGCTTAGGGGATTTGATTTCTCGTCCGAATTTTCAGTTGCAGTGGGGACTTCGATTGAGAATTGCCATTGGAGTTGCTCAAGGACTGGCATATCTTCACAAGGATTATGTCCCTCACTTGCTTCACAGAAATGTCAAGTCAAGTAACATTTTGTTGGAAGCAAACTTTGAGCCAAAACTCACAGATTTCGCTCTTGATCGAGTAGTGGGAGAAGCTGCATTTCAATCAGTTTTGAACTCTGAAGCAGCATCTTCATGTTACATTGCACCAGAAAATGGTTACAGTAAGAAAGCAACTGAACAATTGGACATCTACAGCTTTGGTGTGGTATTGCTAGAGCTAGTGAGTGGCAGGAAAGCAGAGCAAACAGAGTCTAGTGACTCACTTGACATTGTGAAGTGGGTTAGAAGGAAAGTGAATATCACTAATGGGGTGCAACAAGTTCTTGACCCTAAAATCTCACACACTTGTCACCAAGAAATGATTGGAGCCTTAGACATTGCGCTTCGTTGCACTTCTGTGGTGCCTGAGAAAAGGCCATCCATGGTAGAAGTTGTAAGAGGCCTTCTGTCCTTGGAGTCAAGAACTTGCATTGCAAATTTGCATGAACCATATGAGGAACCCTCCATTCCAGTCTGA 2667 0.4244 MATTTFCTYLFLLLSVYLSIFINLSSSSSEGDILLSFKASIEDSKKALSSWFNTSSNHHCNWTGITCSTTPSLSVTSINLQSLNLSGDISSSICDLPNLSYLNLADNIFNQPIPLHLSQCSSLETLNLSTNLIWGTIPSQISQFGSLKVLDLSRNHIEGNIPESIGSLKNLQVLNLGSNLLSGSVPAVFGNLTKLEVLDLSQNPYLVSEIPEDIGELGNLKQLLLQSSSFQGGIPESLVGLVSLTHLDLSENNLTGGVTKALLPSSLKNLVSLDVSQNKLLGPFPSGICKGQGLIINLSLHTNAFTGSIPNSIGECKSLERFQVQNNGFSGDFPIGLWSLPKIKLIRAENNRFSGKIPESVSGAGQLEQVQLDNNTFAGKIPQGLGLVKSLYRFSASLNRFYGELPPNFCDSPVMSIVNLSHNSLSGQIPELKKCRKLVSLSLADNSLIGEIPSSLAELPVLTYLDLSDNNLTGSIPQGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLEGNPGLCGPGLPNSCSDDMPKHHIGSTTTLACALISLAFVAGTAIVVGGFILYRRSCKGDRVGVWRSVFFYPLRITEHDLLMGMNEKSSRGNGGAFGKVYVVNLPSGELVAVKKLVNFGNQSSKSLKAEVKTLAKIRHKNVVKILGFCHSDESVFLIYEYLHGGSLGDLISRPNFQLQWGLRLRIAIGVAQGLAYLHKDYVPHLLHRNVKSSNILLEANFEPKLTDFALDRVVGEAAFQSVLNSEAASSCYIAPENGYSKKATEQLDIYSFGVVLLELVSGRKAEQTESSDSLDIVKWVRRKVNITNGVQQVLDPKISHTCHQEMIGALDIALRCTSVVPEKRPSMVEVVRGLLSLESRTCIANLHEPYEEPSIPV 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01295 888 Pfam Leucine rich repeat 146 204 IPR001611 GO:0005515
Gma03g01295 888 PANTHER - 5 874 - -
Gma03g01295 888 ProSiteProfiles Leucine-rich repeat profile. 461 484 IPR001611 GO:0005515
Gma03g01295 888 Pfam Leucine Rich repeat 243 256 IPR001611 GO:0005515
Gma03g01295 888 Pfam Protein kinase domain 606 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01295 888 SUPERFAMILY Protein kinase-like (PK-like) 605 864 IPR011009 -
Gma03g01295 888 Gene3D Transferase(Phosphotransferase) domain 1 673 879 - -
Gma03g01295 888 ProSiteProfiles Leucine-rich repeat profile. 146 168 IPR001611 GO:0005515
Gma03g01295 888 PRINTS Leucine-rich repeat signature 244 257 - -
Gma03g01295 888 PRINTS Leucine-rich repeat signature 267 280 - -
Gma03g01295 888 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Gma03g01295 888 Pfam Leucine Rich Repeat 462 483 IPR001611 GO:0005515
Gma03g01295 888 SUPERFAMILY L domain-like 209 523 - -
Gma03g01295 888 ProSiteProfiles Protein kinase domain profile. 597 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma03g01295 888 SMART LRR_typ_2 459 482 IPR003591 -
Gma03g01295 888 SMART LRR_typ_2 168 191 IPR003591 -
Gma03g01295 888 SMART LRR_typ_2 267 291 IPR003591 -
Gma03g01295 888 SMART LRR_typ_2 144 167 IPR003591 -
Gma03g01295 888 SMART LRR_typ_2 96 120 IPR003591 -
Gma03g01295 888 SMART LRR_typ_2 241 264 IPR003591 -
Gma03g01295 888 SMART LRR_typ_2 192 217 IPR003591 -
Gma03g01295 888 Gene3D Ribonuclease Inhibitor 208 262 IPR032675 -
Gma03g01295 888 Gene3D Ribonuclease Inhibitor 263 530 IPR032675 -
Gma03g01295 888 Gene3D Phosphorylase Kinase; domain 1 591 672 - -
Gma03g01295 888 SUPERFAMILY L domain-like 28 290 - -
Gma03g01295 888 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 874 - -
Gma03g01295 888 Gene3D Ribonuclease Inhibitor 26 207 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01295 Gma-Chr3 39092113 39095336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01295 34 863 Receptor kinase-like Gene Family AT5G06940 66.228 0.0 1088
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma03g01295 Pkinase 1.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01295 - - gmx:100794428 1599.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01295 03 39092113 39095336 Gma03g01295 03 39092113 39095336 ECH
Gma19g01350 19 42802242 42805617 Gma03g01295 03 39092113 39095336 GST