Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01294 ATGAACATGTGTTCCAAGTGTTACAAGGACATGCTGTTGAAGCAGGAGCAGGACAATTTTGCAGCATCGTCGGTTGAAAACATTGTGAATGGCAGTTCCAATGGCAATGGGGCTGTGACTACTGGTGCTGTTGATGTACAAGTTGAAGCTGTGGAGGTCAAGACTGTCTCTGCTCAGAGTTCTGTAGATTCATCCTCCGGTGAGAGTTTGGAGATGAAAGCCAAGAACAGTCCCAGTAGATGCGCTACATGCCGGAAACGTGTTGGGTTAACTGGTTTCAGCTGCAAATGTGGCAACCTCTTCTGTGCAATGCATCGCTATTCTGATAAACATGAATGCCCTTTTGATTATAGGACTGTTGGTCAGGATGCCATAGCTAAAGCCAACCCGATAGTTAAGGCAGATAAGCTTGACAAAATCTAG 423 0.4563 MNMCSKCYKDMLLKQEQDNFAASSVENIVNGSSNGNGAVTTGAVDVQVEAVEVKTVSAQSSVDSSSGESLEMKAKNSPSRCATCRKRVGLTGFSCKCGNLFCAMHRYSDKHECPFDYRTVGQDAIAKANPIVKADKLDKI 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01294 140 SMART AN1_Zf_4 81 118 IPR000058 GO:0008270
Gma03g01294 140 SUPERFAMILY AN1-like Zinc finger 72 135 IPR035896 -
Gma03g01294 140 Pfam AN1-like Zinc finger 81 117 IPR000058 GO:0008270
Gma03g01294 140 Gene3D - 54 136 IPR035896 -
Gma03g01294 140 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8 1 140 - -
Gma03g01294 140 Gene3D - 1 33 - -
Gma03g01294 140 ProSiteProfiles Zinc finger AN1-type profile. 75 121 IPR000058 GO:0008270
Gma03g01294 140 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01294 Gma-Chr3 39078968 39079390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01294 1 140 C2H2 Transcription Factor Family AT3G52800 39.333 1.52e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01294 - - gmx:100306347 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01294 03 39078968 39079390 Gma03g01294 03 39078968 39079390 ECH
Gma03g01294 03 39078968 39079390 Gma11g01199 11 10246538 10246975 ECH
Gma03g01294 03 39078968 39079390 Gma12g00501 12 4191705 4195580 ECH
Gma03g01294 03 39078968 39079390 Gma13g03046 13 44833648 44834046 ECH
Gma03g01294 03 39078968 39079390 Gma15g00316 15 2730997 2733338 ECH