Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01263 ATGACATCACTACCCTCACGGGGTCCTAGCCGTTACATCGGCTCACAGTACCAAATTTCACAATCGTCATTTCAAAACCAAAGAAGGGCATTCCGATTAGGGTTGGGGTTAGGGTTTGGTTCGATCATGGCTTCGTCTTCCTCCGATCCGGGAAAGTCCGCGGAGACGTCGGAGGCCGCGGCGTTGGCGGTGGCGAACGACCAGCTCTTGCTCTACAGAGGATTGAAGAAGGCCAAGAAGGAAAGAGGTTGCACGGCGAAAGAGCGCATCAGCAAAATGCCTCCGTGCGCCGCCGGCAAACGCAGCTCCATATATCGCGGCGTCACGAGGCATAGGTGGACTGGTCGTTATGAAGCGCATCTTTGGGATAAGAGTACGTGGAACCAAAATCAGAATAAGAAGGGAAAGCAAGGTTCGGTTCGGTTCGGGGCGTATGATGACGAGGAAGCGGCGGCCAGAGCATATGATCTTGCTGCTCTCAAATATTGGGGTCCTGGGACTCTCATTAACTTTCCTGTGACGGATTATGCAAGAGATCTTGAAGAAATGCAGAATGTGTCGAGAGAAGAGTACCTTGCATCTTTACGGCGGAAGAGCAGTGGTTTTTCAAGAGGACTAGCAAAATATCGTGGACTCTCCAGTCGATGGGATCCTACATATGGCCGTATGTCTGGATCTGATTACTTCAATAGCATGCATTATGGTGCAGGGGATGATTCTGCAGCAGAAAGTGAATATGTAAGTGGCTTCTGCTTAGACAGAAAGATTGATTTAACAAGTCACATCAAATGGTGGGGATCTAATAAGAGTAGACATTCTGATGCTGGGACAAGATTATCAGAAGAAAAGAAACTTGGTTCTGCTGGAGATGTTTGCAGCGAACTTAAGCAATTGGAGCAGAAAGTTCAACCTATGGAACCTTACCAGATGCCACAGTTAGGCAGGCTACACAATGAGAAGAAGCATAGAAGTTCTTCACTCTCTGCCTTAAGTATCTTGTCACAATCTGCTGCTTACAAGAGCTTGCAAGAGAAAGCATCAAAGAGACAGGAAAATAGTACTGATAATGATGAGAATGAAAACAAAAATACAATCAACAAGTTGGATCATGGCAAGGCAGTTGAGAAACCATCAAATCATGATGGGGGCAATGATCGGCTCAACATTGCAATGGGAATGAGTGGAACAATGTCTCTTCAAAGAAATGCTTACCCATTGACTCCATTCTTGTCCGCACCACTTTTAACAGCCTACAATACTGTTGATCCATTGGTAGATCCTGTTCTCTGGACATCTCTTGTTCCCATGCTTCCTGCTGGCCTTTCTCGTACAGCTGAGGTTACAAAGACCGAGACCAGTTTGGAGACCAGTTCAACGTACACTATGTTTCAGCCAGAGGAATGA 1404 0.4658 MTSLPSRGPSRYIGSQYQISQSSFQNQRRAFRLGLGLGFGSIMASSSSDPGKSAETSEAAALAVANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGSVRFGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYARDLEEMQNVSREEYLASLRRKSSGFSRGLAKYRGLSSRWDPTYGRMSGSDYFNSMHYGAGDDSAAESEYVSGFCLDRKIDLTSHIKWWGSNKSRHSDAGTRLSEEKKLGSAGDVCSELKQLEQKVQPMEPYQMPQLGRLHNEKKHRSSSLSALSILSQSAAYKSLQEKASKRQENSTDNDENENKNTINKLDHGKAVEKPSNHDGGNDRLNIAMGMSGTMSLQRNAYPLTPFLSAPLLTAYNTVDPLVDPVLWTSLVPMLPAGLSRTAEVTKTETSLETSSTYTMFQPEE 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01263 467 PRINTS Ethylene responsive element binding protein signature 154 174 IPR001471 GO:0003700|GO:0006355
Gma03g01263 467 PRINTS Ethylene responsive element binding protein signature 105 116 IPR001471 GO:0003700|GO:0006355
Gma03g01263 467 SUPERFAMILY DNA-binding domain 103 173 IPR016177 GO:0003677
Gma03g01263 467 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 49 459 - -
Gma03g01263 467 SMART rav1_2 104 178 IPR001471 GO:0003700|GO:0006355
Gma03g01263 467 ProSiteProfiles AP2/ERF domain profile. 104 172 IPR001471 GO:0003700|GO:0006355
Gma03g01263 467 Gene3D AP2/ERF domain 104 174 IPR036955 GO:0003700|GO:0006355
Gma03g01263 467 MobiDBLite consensus disorder prediction 344 382 - -
Gma03g01263 467 Pfam AP2 domain 104 164 IPR001471 GO:0003700|GO:0006355
Gma03g01263 467 MobiDBLite consensus disorder prediction 341 386 - -
Gma03g01263 467 PANTHER BNAA03G19580D PROTEIN 49 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01263 Gma-Chr3 38633167 38636803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01263 63 465 AP2-EREBP Transcription Factor Family AT2G41710 63.504 7.29e-165 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma03g01263 AP2 4.4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01263 K09285 - gmx:100814117 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01307 19 42303269 42307344 Gma03g01263 03 38633167 38636803 GST