Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01262 GAATTGTTCAAATCCCAAAATTAAAGGAGCAGTTGTGTTTTATGAACAAGGTCCTCAATCATTTGATTATAGCATACGCCTCAATCATACATGGGCTTTCTCCGGTTTTCCAGATGTTACAACAATAATGGATACAAATGGCCCTTTTCTTAATGACTTGGAACTTGGTGTTAGTGCTGTACCAACAATGCAATACAGCTTCAGTGGGTTTTTGACTCTCCAGCAAATGGTTGATTCGTTCATAATATTAATAGCGCAGCAGTCTGACTTCAATTTCAATGCTGAAAATCTAGAGCTTCCTCTTCCAGGCTTCTATGACAATAATTTCTCATTGAAAAATCCTTGGACTCAGTTTAACCCTGCACGCATACGAATAGCTCCATTTCCCACTCGAGAGTACACTGATGATCAGTTCCAGTCAATCATAAAGAGAGTCATGGGAATATTGTACTTATTGGGGTTTCTCTATCCAATTTCTCGCCTAATCAGTTATTCTGTGTATGAGAAGGAACAGAAGATTAAAGAAGGACTCTATATGATGGGCCTGAACGATGGTATATTTCACCTTTCTTGGTTTATCACATATGCTTTGCAGTTTGCAATTTCTTCTGGGATCCTTACAGCTTGCACAATGGATAATTTATTCAAGTATAGTGATAAGACACTGGTGTTTGCATACTTTTTCGTTTTTGGGCTTAGTGCAATCATGCTCTCATTCTTTATATCAACGTTTTTCAAACGGGCCAAAACAGCTGTAGCTGTTGGAACTCTGGCGTTTCTTGGAGCCTTTTTCCCTTATTACACTGTCAACGAGGAGGGAGTTTCAATAATCTTGAAGGTTATTGCTTCCTTACTTTCACCTACAGCCTTTGCTTTGGGTTCGATCAACTTTGCTGATTATGAGCGTGCTCATGTTGGACTCCGTTGGAGCAACATATGGCGGGAATCATCTGGAGTGAACTTTTTGGCATGTCTTCTGATGATGATACTTGATACACTGCTATATTGTGCGACTGGACTTTATTTTGACAAGGCATGTCTTTGGGAGTATGGACTGAGATACCCATGGAGCTTTATTTTCCAAAAGGACTTCTGGAGGAAGAAAAAAATTCTAAAACATTGTTCCTCCGGTTTTAAAGTTGAAATATCTGATAAAAATTCTGAGTCAGAAGGGAATCTTTCAGGGGAATATACTTCCAAATCTGGCATAGAAGCAATAAGCTTAGAGATGAAACAACAGGAGCTTGATGGCAGGTGCATTCAAATCAGGAATTTGCATAAAGTTTATGCTACGAAGAAAGGAGATTGCTGTGCTGTTAACTCATTACAGCTGACACTGTATGAAAACCAGATTCTTGCCCTTCTAGGACATAATGGAGCTGGGAAAAGCACGACAATCTCAATGCTTGTTGGTCTGCTTCCTCCTACTTCTGGGGATGCTTTGGTGTTTGGAAAGAACATTGTATCAGATATTGATGAGATACGGAAGGTTTTGGGTGTCTGCCCACAACATGATATACTCTTTCCTGAATTAACAGTTAGAGAGCATTTAGAACTATTTGCGACATTAAAGGGTGTGGAGGAACACTCATTGGACAATGCTGTTATTAATATGGCGGATGAGGTGGGCCTGGCAGATAAAATCAACAGTATTGTGAGAACTCTTTCTGGTGGCATGAAGAGGAAATTGTCTCTTGGAATTGCGTTGATTGGAAGCAGTAAGGTTATAGTCCTTGATGAACCTACTAGTGGAATGGATCCATACTCGATGCGCTTGACTTGGCAATTAATAAAAAAAATTAAGAAGGGAAGGATAATTTTGCTAACTACACATTCTATGGATGAAGCAGATGAACTAGGTGACCGCATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGCTCACTTTTCTTGAAGCATCATTATGGAGTTGGCTATACTCTAACTCTTGTGAAGTCAGCTCCTACTGCTTCTATAGCTGGTGATATTGTATACCGTCATGTTCCATCTGCAACATGTGTAAGCGAGGTTGGAACTGAGATTTCTTTCAGGCTTCCAATGGCATCCTCGTCAGCCTTTGAGAGGATGTTTAGAGAAATTGAAGGTTGCATGAAAAAAACAGTTTCAAATATGGAATTGAGTGGAAATGGTGACAAAGACAGTCTTGGTATTGAAAGCTATGGTATATCTGTAACAACCCTGGAGGAGGTATTTTTGAGAGTTGCAGGATGTGACTATGATGAAGTTGAATGCTTTGTAGAAAATAACCATACCCATAAATCAGACTCGGTGGCTTCTCTTCCTACTAATGATCATCCTTCCACAAAAATAAGTTGTCTTAAGTTTTTTGGAAATTATAAGAAGATTTTTGGTTTCATGACTACCATGTTGGGAAGAGCCTGTGGCTTAATTTTTGCCACAGTTATTAGTTTTATCAACTTCTTGGGTATGCAGTGCTGTAGCTGTTGTTTCATTACAAGGTCAACATTTTGGCAACATTCTAAAGCCTTATTCATTAAAAGGGCAATATCTGCTCGGAGAGATCACAAAACAATTATTTTCCAGCTAATGATTCCTACTCTCTTCTTGTTTATTGGTCTTCTATTTCTGAAGCTCAAGCCACATCCTGATCAGCAATCACTCACCCTTTCAACTTCTCATTTTAATCCTCTATTGAGTGGTGGGGGTGGAGGAGGCCCAATTCCGTTTAATCTATCTTTGCCAATTGCTGAAAAGGTAGCACAAAATGTCATCGGAGGGTGGATTCAGAGGTTCAAGCCAAGCTCGTACAGATTCCCTAATTCAGAAAAGGCATTGGCTGATGCAGTGGAAGCGGCAGGACCAACCTTGGGACCTGCTCTACTTTCAATGAGTGAATATTTGATGTCAAGCTTTAATGAATCCTACCAATCTAGGTATGGGGCAATTGTGATGGATGACCAGAATAATGATGGAAGCTTAGGATACACTGTATTACACAACTGTTCCTGTCAACATGCTGCTCCTACATTTATCAATTTGATGAATTCTGCAATTCTCAGGCTTGCAACTCATGACACAAACATGACAATTCAGACACGCAACCACCCCTTACCAACGACACAAAGCCAGCGCTTACAACGTCATGACCTGGATGCCTTCTCTGCTGCAGTTATTGTCAATATTGCTTTCTCTTTTATACCTGCCTCATTTGCCGTTTCAATTGTTAAGGAACGTGAAGTGAAAGCTAAGCAGCAACAACTAATCAGTGGGGTTTCTGTCCTGTCATATTGGGCTTCTACATTTATTTGGGACTTCGTGAGCTTCTTGTTTCCGGCCTCTTTTGCCATAGTTCTCTTTTACGTCTTTGGTCTGGATCAGTTTGTTGGAGGGGTTTCTTTGTTACCAACAATCCTCATGCTTTTGGAATATGGACTTGCAATCGCATCATCAACTTATTGCCTTACATTTTTCTTTTTTGACCATACCATGGCGCAGAATGTGGTTCTCTTGATCCACTTTTTCTCTGGATTGATACTGATGGTTATCTCATTCATTATGGGACTCATGCCATCAACAATGAGTGCCAATTCTTTTCTTAAGAATTTTTTCAGAATATCTCCTGGATTTTGTTTCGCTGATGGTCTTGCTTCACTAGCTCTTTTACGGCAAGGAATGAAAGATAAAACAAGTGATGGGGTGTTTGATTGGAATGTTACTGGGGCTTCCATCTGTTATCTTGCTGTTGAGAGCTTTAGTTACTTTCTGTTGACGCTTGCACTTGAAATGTTTCCTTCTCTCAATTTGACTTCATTCATGATCAAGAAGTGGTGGGGAAAAATTAATATCTTCCAGCATAATAATCCCTATTTGGAACCTCTGTTAGAATCATCTTCCGAAACTGTTGCTATGGACTTCGATGAAGATGTAGATGTGAAAACAGAGAGAAATAGAGTACTTTCAGGTTCCCTTGACAATTCCATTATCTACCTTCGCAATCTCCGTAAGGTATATTTTGAGGAGAAGCATCATGGGAGAAAGGTTGCAGTAGATTCATTAACTTTCTCAGTTCAGGAAGGAGAATGTTTTGGCTTTTTAGGAACAAATGGAGCTGGAAAGACCACAACTATTTCTATGCTATGTGGGGAAGAATGTCCTTCTGATGGGACTGCTTTTATTTTTGGCAAAGATATATGTTCCCATCCGAAGGCTGCTCGCCGATATATTGGATATTGTCCACAATTTGATGCTCTATTGGAATTCTTAACTGTCCGAGAACATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCAGATTTTGCAATAGACAATGTTGTTATGGAAAAGTTGACAGAATTTGACTTATTGAAGCATGCTAATAAACCATCATTTTCACTTAGTGGAGGGAATAAACGAAAACTGTCTGTTGCAATTGCAATGATTGGAGATCCTCCTATTGTCATTCTTGATGAGCCATCCACAGGTATGGATCCCATTGCCAAAAGGTTCATGTGGGATGTAATATCTAGGATCTCAACAAGGCGAGGAAAGACTGCAGTAATTCTTACTACTCACAGCATGAATGAAGCTCAAGCCTTATGTACCAGAATAGGGATAATGGTTGGTGGACGATTACGATGCATTGGAAGTCCACAGCATCTAAAAACAAGATTTGGGAATCATCTGGAACTAGAGGTCAAACCTACTGAAGTGAGTTCTGCAGACTTGCAAAACCTCTGCCAAGCTATTCAAGAAAGACTTCTTGATGTCCCTTCTCATCCTAGAAGCTTACTTAATGACCTTGAAATTTGCATTGGGGGCACTGACTCCGTCACATCAGGAAATACATCCATTGCGGAGATTAGCTTGACACGAGAAATGATAGGCTTAATTGGGCGCTGGCTTGACAATGAAGAAAGAGTAAAAACACTAATCTCTGGTACACCTGTCTGTGATGGAGCTTCTCAGGAACAGTTATCAGAACAACTGTTTCGAGATGGTGGCATTCCATTGCCAGTATTTTCTGAGTGGTGGCTGTCTAAACAAAAATTCTCAGAAATTGATTCTTTTATTCTCTCTTCATTTCGTGGGGCAAGATGCCAAGGGTGCAATGGTTTGAGCATCAGATATCAGTTACCATATAATGAAGATTTTTCCCTAGCAGATGTTTTTGGACTTCTTGAAAGAAACAGAAATAGATTAGGGATTGCAGAGTACAGCATCAGCCAATCAACTCTCGAGACAATATTTAATCATTTTGCAGCTAATCCATGA 5260 0.3987 NCSNPKIKGAVVFYEQGPQSFDYSIRLNHTWAFSGFPDVTTIMDTNGPFLNDLELGVSAVPTMQYSFSGFLTLQQMVDSFIILIAQQSDFNFNAENLELPLPGFYDNNFSLKNPWTQFNPARIRIAPFPTREYTDDQFQSIIKRVMGILYLLGFLYPISRLISYSVYEKEQKIKEGLYMMGLNDGIFHLSWFITYALQFAISSGILTACTMDNLFKYSDKTLVFAYFFVFGLSAIMLSFFISTFFKRAKTAVAVGTLAFLGAFFPYYTVNEEGVSIILKVIASLLSPTAFALGSINFADYERAHVGLRWSNIWRESSGVNFLACLLMMILDTLLYCATGLYFDKACLWEYGLRYPWSFIFQKDFWRKKKILKHCSSGFKVEISDKNSESEGNLSGEYTSKSGIEAISLEMKQQELDGRCIQIRNLHKVYATKKGDCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNIVSDIDEIRKVLGVCPQHDILFPELTVREHLELFATLKGVEEHSLDNAVINMADEVGLADKINSIVRTLSGGMKRKLSLGIALIGSSKVIVLDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASIAGDIVYRHVPSATCVSEVGTEISFRLPMASSSAFERMFREIEGCMKKTVSNMELSGNGDKDSLGIESYGISVTTLEEVFLRVAGCDYDEVECFVENNHTHKSDSVASLPTNDHPSTKISCLKFFGNYKKIFGFMTTMLGRACGLIFATVISFINFLGMQCCSCCFITRSTFWQHSKALFIKRAISARRDHKTIIFQLMIPTLFLFIGLLFLKLKPHPDQQSLTLSTSHFNPLLSGGGGGGPIPFNLSLPIAEKVAQNVIGGWIQRFKPSSYRFPNSEKALADAVEAAGPTLGPALLSMSEYLMSSFNESYQSRYGAIVMDDQNNDGSLGYTVLHNCSCQHAAPTFINLMNSAILRLATHDTNMTIQTRNHPLPTTQSQRLQRHDLDAFSAAVIVNIAFSFIPASFAVSIVKEREVKAKQQQLISGVSVLSYWASTFIWDFVSFLFPASFAIVLFYVFGLDQFVGGVSLLPTILMLLEYGLAIASSTYCLTFFFFDHTMAQNVVLLIHFFSGLILMVISFIMGLMPSTMSANSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGVFDWNVTGASICYLAVESFSYFLLTLALEMFPSLNLTSFMIKKWWGKINIFQHNNPYLEPLLESSSETVAMDFDEDVDVKTERNRVLSGSLDNSIIYLRNLRKVYFEEKHHGRKVAVDSLTFSVQEGECFGFLGTNGAGKTTTISMLCGEECPSDGTAFIFGKDICSHPKAARRYIGYCPQFDALLEFLTVREHLELYARIKGVPDFAIDNVVMEKLTEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVSSADLQNLCQAIQERLLDVPSHPRSLLNDLEICIGGTDSVTSGNTSIAEISLTREMIGLIGRWLDNEERVKTLISGTPVCDGASQEQLSEQLFRDGGIPLPVFSEWWLSKQKFSEIDSFILSSFRGARCQGCNGLSIRYQLPYNEDFSLADVFGLLERNRNRLGIAEYSISQSTLETIFNHFAANP 1752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01262 1752 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1179 1522 IPR026082 GO:0016021|GO:0055085|GO:0140359
Gma03g01262 1752 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1513 1749 IPR026082 GO:0016021|GO:0055085|GO:0140359
Gma03g01262 1752 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 18 1178 IPR026082 GO:0016021|GO:0055085|GO:0140359
Gma03g01262 1752 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 417 658 IPR027417 -
Gma03g01262 1752 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1179 1522 - -
Gma03g01262 1752 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1513 1749 - -
Gma03g01262 1752 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 18 1178 - -
Gma03g01262 1752 CDD ABC_subfamily_A 1324 1550 - -
Gma03g01262 1752 Pfam ABC-2 family transporter protein 107 336 - -
Gma03g01262 1752 Pfam ABC-2 family transporter protein 852 1254 - -
Gma03g01262 1752 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 420 653 IPR003439 GO:0005524
Gma03g01262 1752 Pfam ABC transporter 1346 1488 IPR003439 GO:0005524
Gma03g01262 1752 Gene3D - 1316 1566 IPR027417 -
Gma03g01262 1752 Gene3D - 407 656 IPR027417 -
Gma03g01262 1752 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1324 1562 IPR003439 GO:0005524
Gma03g01262 1752 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1323 1553 IPR027417 -
Gma03g01262 1752 Pfam ABC transporter 440 583 IPR003439 GO:0005524
Gma03g01262 1752 CDD ABC_subfamily_A 420 641 - -
Gma03g01262 1752 ProSitePatterns ABC transporters family signature. 1461 1475 IPR017871 GO:0005524
Gma03g01262 1752 SMART AAA_5 448 630 IPR003593 -
Gma03g01262 1752 SMART AAA_5 1354 1541 IPR003593 -
Gma03g01262 1752 ProSitePatterns ABC transporters family signature. 555 569 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01262 Gma-Chr3 38560275 38619622 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01262 396 656 Calmodulin-binding Proteins AT2G36910 25.830 7.52e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01262 K05643 - gmx:100803263 3471.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01262 03 38560275 38619622 Gma03g01262 03 38560275 38619622 ECH