Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01258 ATGGATTTGCTGGCTAATGTTGCAGTGGAGAATAAGAGGAGAGTGTGTCTGGTTTGGGAAGATTTGACAGTGGTGGCATCAAGTGTTAACAATAGTCCAAAAAGGGAATTGTTAAAAGGGTTAAGTGGTTATGCAGAACCTAACCGGATTATGGCACTCATTGGTCCTTCAGGATCCGGGAAATCTACTGTACTTGCTGCACTGGCTGGGATACTTCCCACCAATGTTAGCATGACAGGAAATGTACTACTCAACGGGACTACCAGAAGTACCGGCTGCAGAGATATTTCTTATGTTACTCAAGAAGATTATTTTTTGGGAACTCTAACAGTGAAGGAAACCCTGACTTATGCAGCTCATTTGAGACTTCCTGCTGATATGACTAAAAATGAGATTGATAAGGTTGTAACCAAGATATTGGCTGAAATGGGTCTGCAAGATAGTGCAGATAGCAGACTTGGGAATTGGCATTTGAGAGGCATAAGTAGTGGAGAGAAAAGAAGGCTTAGCATAGGCATTGAGATCTTAACTCAACCTCATGTAATGTTTCTGGATGAACCCACTAGTGGGTTGGATAGTGCAGCTGCTTTCTATGTGATTTCTTCTCTGTCAAACATTGCACATGATGGAAGAATAGTTATATGCTCCATTCACCAGCCAAGTGGTGAAGTTTTCAACCTTTTCGATGATCTGGTCCTCCTTGCAGGAGGTGAATCTGTATATTTTGGAGAAGCAACTATGGCTGTAAAGTTCTTTGCTGATGCAGGGTTCCCTTGTCCAACAAGAAAGAATCCTCCTGAGCATTTCCTTCGTTGCGTTAACTCGGAGTTTGATAGTGTTGCAGCCTTAATGCAGTCCAAAAAGGTCAGTGAAGCCTCATCTTCATGGAATTCTCTAATGAAGATGACAACAGAAGAGATTAAATCAGAACTCATAAAGTACTACAGGAATTCCATTCAGTCAGAAAATGCAAGGAAAAAAATCAGAGAAATCAAACAAAGTCTATATGTTGCTATGTTACAGGAAGAACCTTTAGTTGAGAAGATATATGATACCAGCAGGCTGAAGCAGCTATGCACATTGACAAATAGATCAATTCTAAATATGACCAGAGACATTGGTTACTATTGGTTAAGGATTGTATTCTATATCTTGATATCAGTGAGTGCTGGTTTTCTTCTTTTCAACATAGGAACAAGTAATGAAGCAATCTTAACTAGAGGCAAGTGTGATGGATTCATCGTTGGCTTGATGATCTTCTTATGTTTAGGCGGCGTACCCTTTTACCATGAGGAATTAAAGGTCTTCAAACGTGAAAGATTTGGAAATCATTACGGCGAAGCCATGTTTGTGCTGTCACATTTCCTCTCATCACTCCCTTTTGTTCTTGCAATTTCCCTCTCTTCAGGAACAATACTTTACCACATGGTGAACTTTCATCCAGGCTTCTCTCATTACTGCTATTTTTGCATGAATATATTTTGCCTCATTGCTGTCACAGAAGGCTGCACATTATTCTTTGCAGCACTTGCCCCCGACCTATTGGTAGCAATGGGAACTGCAACCGGTGCCATTGTATTCATGATGGTGCCATCTAATATATTCAGAAGCCTAGCAGACCTTCCAAAATTCTTTTGGCGCTATCCAATGTCCTATATCAGCTACATTACATGGTCAATACAGGGTCAGTTCAAGAATGACCTGATAGGTCTTGAATTTGAACCACAGGTGCCCGGGGGTACCAAGATAAAGGGTGAAGAGATACTTCATGATATGTTTGGAATTCGAAATGATTACTCAAAATGGTGGGACTTAGGAGTTCTGGTTTTGTTCTTGATATGTTATAGGTTGCTCTTTTTCTTGGTTCTTAAGCACAAGGAGAGAGTTACATCATTATTACACACCAAAAGAACTATCCCAGACATTTTACTCAGAAGATCCTCATTGAAGAACAAATATATCTCTTCGAAGCAACGTCAATCCCTGCATCCTTTGTCAGCTCAAGAGGGTCTTTACTCTCCAATTTCTTAA 2031 0.4032 MDLLANVAVENKRRVCLVWEDLTVVASSVNNSPKRELLKGLSGYAEPNRIMALIGPSGSGKSTVLAALAGILPTNVSMTGNVLLNGTTRSTGCRDISYVTQEDYFLGTLTVKETLTYAAHLRLPADMTKNEIDKVVTKILAEMGLQDSADSRLGNWHLRGISSGEKRRLSIGIEILTQPHVMFLDEPTSGLDSAAAFYVISSLSNIAHDGRIVICSIHQPSGEVFNLFDDLVLLAGGESVYFGEATMAVKFFADAGFPCPTRKNPPEHFLRCVNSEFDSVAALMQSKKVSEASSSWNSLMKMTTEEIKSELIKYYRNSIQSENARKKIREIKQSLYVAMLQEEPLVEKIYDTSRLKQLCTLTNRSILNMTRDIGYYWLRIVFYILISVSAGFLLFNIGTSNEAILTRGKCDGFIVGLMIFLCLGGVPFYHEELKVFKRERFGNHYGEAMFVLSHFLSSLPFVLAISLSSGTILYHMVNFHPGFSHYCYFCMNIFCLIAVTEGCTLFFAALAPDLLVAMGTATGAIVFMMVPSNIFRSLADLPKFFWRYPMSYISYITWSIQGQFKNDLIGLEFEPQVPGGTKIKGEEILHDMFGIRNDYSKWWDLGVLVLFLICYRLLFFLVLKHKERVTSLLHTKRTIPDILLRRSSLKNKYISSKQRQSLHPLSAQEGLYSPIS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01258 676 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 16 634 - -
Gma03g01258 676 Pfam ABC-2 type transporter 357 562 IPR013525 GO:0016020|GO:0140359
Gma03g01258 676 ProSitePatterns ABC transporters family signature. 161 175 IPR017871 GO:0005524
Gma03g01258 676 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 16 634 - -
Gma03g01258 676 Pfam ABC transporter 38 189 IPR003439 GO:0005524
Gma03g01258 676 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 17 261 IPR003439 GO:0005524
Gma03g01258 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 247 IPR027417 -
Gma03g01258 676 Gene3D - 7 254 IPR027417 -
Gma03g01258 676 SMART AAA_5 47 246 IPR003593 -
Gma03g01258 676 Pfam ABC-2 type transporter 218 340 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01258 Gma-Chr3 38526904 38532445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01258 33 230 Calmodulin-binding Proteins AT2G36910 27.273 4.09e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01258 - K05681 aip:107646291 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01304 19 42272848 42285660 Gma03g01258 03 38526904 38532445 GST