Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01257 ATGGTGATGTTATGGGAAGATATAACGGTTTCTGTAGCAGACAAGAAGTTGCTGAGTGGAATCACAGGTATTGCTGAAGCTGGTAGGATCATGGCTGTCATAGGAAGACTTCCTGTAAATGTTGTAGTAACCGGGGACATTCTAATTAATGGGAAGAGAAGCTTGTATTCCAGAGAAGTGTCCTACGTTGCACAAGAGGAACTTTTCTTGGGAACTTTAACTGTAAAAGAGACCCTCACATACTCAGCAAACATGAGGCTTCCTTCTAAAATGACCAAAGAAGAGATAGACAAAGTGGTGGAAGAAACCATAGTGGAAATGGGTCTGGAAGATTGTGCAGATACTAGGATTGGAAATTGGCATTGTAGGGGTATTAGTAATGGTGAAAAGAAAAGACTTAGCATTGGCCTTGAGATTCTGACACAACCATATGTCTTACTTCTTGATGAACCTACTACTGGACTTGATAGTGCCTCAGCTTTCTATGTGATTCAATCTCTGTGCCACAATGCTCACAATGGAAAGATAGTTATCTGTTCCATTCACCAGCCAAGTAGTGAAACTTTTAATATATTTGATGATTTGCTTTTGCTTTCAAGTGGGGAAACTGTTTATTTTGGAGAAGCCAATATGGCTCTAAAGTTTTTTGCTGATGCAGGGTTACCCTGTCCTTCTAGAAGAAATCCTTCAGATCATTTTCTTCTTTGTATCAATTTGGACTTTGACTTGGTTACTTCAGCTCTAGCAAGAGCACAATTAGATTTGCTATCTTCATCTAATTCAGCACTGGGAGCGAAAAAAGCCGAGATTAGAGAGACACTCATTCGAAGTTATGAAGGTTCAAGGCTAATGATCAATGCGAGAAGAAGAATTCAACAACTGAAAGCTAATGAAGAGCAAGAAATTAAGGCCAAGATAGGTAGCAGTGCCACGTGGTGGAAGCAGATGTGCACATTGACCAAGCGATCTTTCCTAAACATGACTAGGGACATTGGTTACTACTGGCTGAGGATAGTATTCTACATACTGGTAGGAAATCACTCTCGGCGCCCTCTATTTCCATATTGGCACAGGCAACAACTCAATATTGGATAG 1095 0.4046 MVMLWEDITVSVADKKLLSGITGIAEAGRIMAVIGRLPVNVVVTGDILINGKRSLYSREVSYVAQEELFLGTLTVKETLTYSANMRLPSKMTKEEIDKVVEETIVEMGLEDCADTRIGNWHCRGISNGEKKRLSIGLEILTQPYVLLLDEPTTGLDSASAFYVIQSLCHNAHNGKIVICSIHQPSSETFNIFDDLLLLSSGETVYFGEANMALKFFADAGLPCPSRRNPSDHFLLCINLDFDLVTSALARAQLDLLSSSNSALGAKKAEIRETLIRSYEGSRLMINARRRIQQLKANEEQEIKAKIGSSATWWKQMCTLTKRSFLNMTRDIGYYWLRIVFYILVGNHSRRPLFPYWHRQQLNIG 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01257 364 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 225 IPR003439 GO:0005524
Gma03g01257 364 Pfam ABC-2 type transporter 182 234 IPR043926 GO:0140359
Gma03g01257 364 Pfam ABC transporter 45 152 IPR003439 GO:0005524
Gma03g01257 364 Gene3D - 3 216 IPR027417 -
Gma03g01257 364 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 1 345 - -
Gma03g01257 364 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 345 - -
Gma03g01257 364 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 214 IPR027417 -
Gma03g01257 364 Coils Coil 284 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01257 Gma-Chr3 38516441 38520566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01257 44 167 Calmodulin-binding Proteins AT2G36910 30.303 2.20e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01257 K05681 - gmx:100787198 600.127