Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01256 ATGGTGATGATATGGGAAGATGTAACAGTTGAGAGGCCTGAAAGTTTTGGAGAACACAATAACAATAAGAAGTTAATGCTGAATGGAATCACTGGTTTTGCTGAACCTGCTAGGATTATGGCTGTTATGGGTCCTTCTGGCTGCGGCAAAACTAcctttcttgactctttcactgGAAAACTTGCTGCAAATGTTGTAGTAACCGGCAACATTCTAATCAATGGGAAGAAGAAAAGCTTTTATTCCAAAGAAGTGTCCTACGTGGCACAAGAGGAACTTTTCTTGGGTACTTTGACTGTAAAAGAGACCCTCACATACTCAGCAAACATAAGGCTTCCTTCTAAAATGACCAAAGAAGAGATAAACAAAGTGGTGGAAAATACCATAATGGAAATGGGTCTGGAAGATTGTGCAGATACTAGGATTGGAAATTGGCATTGTAGGGGTATTAGTAATGGTGAAAAGAAGAGACTTAGCATTGGACTTGAAATTCTGACACAACCATATGTCTTACTTCTTGATGAACCTACTACTGGACTTGATAGTGCCTCAGCTTTCTATGTGGTTCAATCTCTATGCCACATTGCTCACAGTGGAAAGATAGTTATCTGTTCTATTCACCAGCCCAGTAGTGAGATTTTTAGTCTGTTTGATGATTTGCTTTTGCTCTCTAGTGGGGAAACTGTTTATTTTGGAGAAGCAAAGATGGCTCTAAAGAAGTTTTTTGCCGATGCAGGTTTCCCCTGCCCTACTAGAAGAAATCCTTCAGATCATTTCCTTATGTGTATTAATTTGGACTTTGAGTTGATTACTGAAGCACTACAGAGGACACAGTTAAATTTGATACCAACAAATTCAACAATTGGAATGAGAACATCAGAGATCAGAAGGATACTTATTCAGAGTTACAAAAGTTCAAAGCTAATGATCGATGCAAGAAAAAGAATTGAACAACTGAAACCCAATGAAGAGCAAGAAATTAAGCCCTACATAGGTAGCAGTACCACATGGAGGAAGCAATTATATACATTGACTGAGAGATCTTTCCTAAACATGACTAGGGACATTGGTTACTACTGGCTGAGGATTGTATTCTACATACTGGTAGGAATTACTATTGGCACCCTCTTTTTTCATATTGGCACAGGAAACAACTCAATCTTGGCTAGAGGAAAGTGTGTATCATTCATCTATGGGTTCATGATTTGTTTGTCATGTGGAGGATTACCATTTTTCATTGAAGAATTGAAGGTTTTCTATGGTGAAAGGTCCAAAGGACATTATGGAGAGGCTGCATTTGTAGTGTCAAACATCATATCTTCATTCCCTTTCCTTGTTCTAACATCACTCTCCTCCGGAATAATCATTTACTTCATGGTGCAATTTCATCCGGGTTTATCTAATTGTGCATTTTTCTGTATCAACTTGTTCTGCTGCCTATCTGTTGTTGAGTGCTGCATCATGATTGTTGCCTCAGTGGTCCCCAATGTGCTGATGGGCATAGGAACAGGAACTGGTGTAATTGTCTTCATGATGATGCCCTCTCAAATATTCAGATCATTACCTGACATTCCAAAGTTCTTCTGGCGCTATCCCATGTCCTACCTCAGTTTTGCTGCTTGGGCAGTTCAGGGACAATACAAGAATGACATGCTGGGGGTTGAATTTGATCCTTTGCTGCCAGGAGATGTTAAAGTTAGTGGAGAACAAGTGCTATCATTGGTATTTGGTGTTCCATTGGATCATAACAAATGGTGGGACTTAACAGCATTGGCTACCTTATTATTAGTTCACAGATTGGTTCTTTACTTGGTGCTTCGGTTTGTCAAAAGAGCTCAATCACCTAAACTGTGGTTCTATGCCAAGAAAAGTTTACACTTTGCAGGAAGATGTTTCTTCAGTAAGAAGCCATCTATCTCTTCCAGGAAACAAGCTCAGCATCCATTATCATCTCAAGAGGGTCTAATGTCCCCAAACCTTGCAATATAA 1989 0.3906 MVMIWEDVTVERPESFGEHNNNKKLMLNGITGFAEPARIMAVMGPSGCGKTTFLDSFTGKLAANVVVTGNILINGKKKSFYSKEVSYVAQEELFLGTLTVKETLTYSANIRLPSKMTKEEINKVVENTIMEMGLEDCADTRIGNWHCRGISNGEKKRLSIGLEILTQPYVLLLDEPTTGLDSASAFYVVQSLCHIAHSGKIVICSIHQPSSEIFSLFDDLLLLSSGETVYFGEAKMALKKFFADAGFPCPTRRNPSDHFLMCINLDFELITEALQRTQLNLIPTNSTIGMRTSEIRRILIQSYKSSKLMIDARKRIEQLKPNEEQEIKPYIGSSTTWRKQLYTLTERSFLNMTRDIGYYWLRIVFYILVGITIGTLFFHIGTGNNSILARGKCVSFIYGFMICLSCGGLPFFIEELKVFYGERSKGHYGEAAFVVSNIISSFPFLVLTSLSSGIIIYFMVQFHPGLSNCAFFCINLFCCLSVVECCIMIVASVVPNVLMGIGTGTGVIVFMMMPSQIFRSLPDIPKFFWRYPMSYLSFAAWAVQGQYKNDMLGVEFDPLLPGDVKVSGEQVLSLVFGVPLDHNKWWDLTALATLLLVHRLVLYLVLRFVKRAQSPKLWFYAKKSLHFAGRCFFSKKPSISSRKQAQHPLSSQEGLMSPNLAI 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01256 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 238 IPR027417 -
Gma03g01256 662 Pfam ABC-2 type transporter 207 262 IPR043926 GO:0140359
Gma03g01256 662 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 250 IPR003439 GO:0005524
Gma03g01256 662 SMART AAA_5 36 227 IPR003593 -
Gma03g01256 662 Pfam ABC transporter 34 177 IPR003439 GO:0005524
Gma03g01256 662 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 1 633 - -
Gma03g01256 662 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 633 - -
Gma03g01256 662 Pfam ABC-2 type transporter 340 545 IPR013525 GO:0016020|GO:0140359
Gma03g01256 662 Gene3D - 6 244 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01256 Gma-Chr3 38495343 38502463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01256 34 219 Calmodulin-binding Proteins AT2G36910 26.396 3.22e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01256 K05681 - gmx:100802207 1298.11