Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01196 ATGAGTAGTGCAGAAACTTTAAAGGGACGGGTTCAGCATACATTAAGACGGCTTGCTCAAAATCGTGAGGCTGCCAGGAAAAGCCGACTGAGGAAAATGGCATATGTGCAACAACTAGAGAGCAGTAGGTTGAAACTGATATCGCCAGCAGGTTTGGGAATATTTATTTCAAGTACTGGAGATCAGGCACAGTCAATGAATGGAAATGGCGCTATGGCATTTGATGTAGAGTACGCACGATGGTTAGAAGAGCATAATAGACAAACCAATGAGCTAAGGACTGCAATAAATTCTCATGCTGGAGATATTGAACTTCGAACCATTGTTGACAATTTCATGACGCAGTTTAATGATATCTTCAGGCTGAAAGCTATTGCAGCAAAAGCTGATGCTTGCCAGATTCTGTCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGGCCATCCGAACTCTTCAAGCTTCTTCTAAGTCAGTTGGAGCCTTTAGTCGAGCAACAGATGGACATCTACAACTTTCAGCAATCATGCCAGCAGGCTGAAGAAGCTCTTTCCCAAGGGATGGATGCATTGCAGCAATCAGTATCTGAGACATTGGCTAATGGTTCGCCCAGCTCATCAGGCTCCCCGGGAAATGTGGCAAATAACATGGGTCAAATAACTATGGCCATGGGAAAGCTTGGTACACTTGAGGGGTTTCTTCTCCAGGCTGACAATCTGCGGCAGCGGACATTAGAAGTAATGCTTCAAATATTAACGACCAGGCAATCGGCTTGTGCTCTTCTTGCCATCAGTGATTATTTCTCACGGCTGAGAGAGCTGGGTTCTTTGTGGCCTTCCAGGCCAAGGGAGTGA 873 0.4582 MSSAETLKGRVQHTLRRLAQNREAARKSRLRKMAYVQQLESSRLKLISPAGLGIFISSTGDQAQSMNGNGAMAFDVEYARWLEEHNRQTNELRTAINSHAGDIELRTIVDNFMTQFNDIFRLKAIAAKADACQILSGMWKTPAERCFMWIGGFRPSELFKLLLSQLEPLVEQQMDIYNFQQSCQQAEEALSQGMDALQQSVSETLANGSPSSSGSPGNVANNMGQITMAMGKLGTLEGFLLQADNLRQRTLEVMLQILTTRQSACALLAISDYFSRLRELGSLWPSRPRE 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01196 290 Pfam Seed dormancy control 88 163 IPR025422 GO:0006351|GO:0043565
Gma03g01196 290 ProSiteProfiles DOG1 domain profile. 71 287 IPR025422 GO:0006351|GO:0043565
Gma03g01196 290 Gene3D - 12 98 - -
Gma03g01196 290 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 16 31 IPR004827 GO:0003700|GO:0006355
Gma03g01196 290 PANTHER TGACG-SEQUENCE-SPECIFIC DNA-BINDING PROTEIN TGA-2.1 5 290 - -
Gma03g01196 290 SUPERFAMILY Leucine zipper domain 15 42 IPR046347 GO:0003700|GO:0006355
Gma03g01196 290 Pfam bZIP transcription factor 15 41 IPR004827 GO:0003700|GO:0006355
Gma03g01196 290 PANTHER TRANSCRIPTION FACTOR TGA9 5 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01196 Gma-Chr3 37667796 37672233 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01196 3 290 bZIP Transcription Factor Family AT5G06950 64.646 5.39e-128 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma03g01196 DOG1 1.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01196 K14431 - gmx:100780071 444.121