Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01193 ATGATTTTTCCATGGATCAACGAAGAAGAACAGGACATAGAAGCTATCGGGTACCACAGTGATAATGATAGTGATCAGTGTGGCAGTGATAGTGAGGGGAATCGTAGAACAGAACCTCATTCTTCCTCTTCTCAGATATGGCCTCAAACTTACAGAGAAGCCACTGATTCTTATTCAATTTCTGCTGCTCCAAATCTTGAATCAATTATACGAGCACCGAGTGTTATTTATTCAAGCTTTATCggtggtggtggttttggtggtggtggttttggtTCAAAGAGTTACTTAGAACACGATGAAAGGACTTCTTTTCTATCTGGCGAGGAACTCACTAATCGAGGGATCTCAAGAAGACAATCAACATGGTGGGAGAAAGCTTCAATTCAAATGCAAATTCCTGAAGAATTACCTGTTGTTTATGGATGTAGCCTCACTCAAACAATATTCAATGGTATGGGGATTAATGTGATGGCCGTTGGCCTTCTATCTACACCTTATACAGTGAAACAAGCTGGGTGGGCGGGTTTGTTTGTGATGCCTTTTTTCGCACTTGTATGTTGTTATACAGCAGACCTTATGAGACACTGCTTTGAAAGCAGAGAAGGGATCATTAGCTACCCAGATATAGGACAAGCTGCATTTGGAAGATATGACCGACTTATTGTATCAGTAAGTTATTGTGTGGAGTTTATCATCTTGGAAGGAGATAACCTCACCAGGCTGTTTCCTGGAACATCCTTACACTGGGGAAGTTTCCAGTTAGACTCCAAACACTTGTTTGGAATTTTAACAGCACTTGTCATTCTCCCAACAGTTTGGTTGAGGGATCTTCGCATAATCTCGTATCTCTCAGCTGGAGGGGTTGTTTCTACAGCATTGATTACTATGTGTGTGTTTTTGGTTGGGACATCTGATTCTGTTGGATTCCATCTCACTGGTCCATTGGTGAAATGGAGCGGCATGCCCTTTGCTTTTGGGACATTGTCTCAGATAACATTGAATCTACCACCAAATGCATTTGCTTCCAAAGTTGCCTTGTAG 1044 0.4013 MIFPWINEEEQDIEAIGYHSDNDSDQCGSDSEGNRRTEPHSSSSQIWPQTYREATDSYSISAAPNLESIIRAPSVIYSSFIGGGGFGGGGFGSKSYLEHDERTSFLSGEELTNRGISRRQSTWWEKASIQMQIPEELPVVYGCSLTQTIFNGMGINVMAVGLLSTPYTVKQAGWAGLFVMPFFALVCCYTADLMRHCFESREGIISYPDIGQAAFGRYDRLIVSVSYCVEFIILEGDNLTRLFPGTSLHWGSFQLDSKHLFGILTALVILPTVWLRDLRIISYLSAGGVVSTALITMCVFLVGTSDSVGFHLTGPLVKWSGMPFAFGTLSQITLNLPPNAFASKVAL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01193 347 Pfam Transmembrane amino acid transporter protein 156 304 IPR013057 -
Gma03g01193 347 PANTHER AMINO ACID TRANSPORTER AVT1A 21 327 - -
Gma03g01193 347 MobiDBLite consensus disorder prediction 18 47 - -
Gma03g01193 347 PANTHER OS05G0424000 PROTEIN-RELATED 21 327 - -
Gma03g01193 347 MobiDBLite consensus disorder prediction 18 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01193 Gma-Chr3 37649237 37652361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01193 18 327 Amino Acid or Auxin Permease AAAP Family AT2G41190 52.147 1.32e-102 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01193 K15015 - gmx:100790344 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01193 03 37649237 37652361 Gma03g01193 03 37649237 37652361 ECH
Gma19g01248 19 41417605 41424089 Gma03g01193 03 37649237 37652361 GST