Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01190 ATGGGTAGCAGAAGTAGAACAGTAAACGTTAACACTAAGGACACTGACAAGGTTCTGAACGGGATGCCAAGCTACGCTCCTCCATTGCCTTCTTCTTCCAATTCCATGGCCATGGAAGCAACTAATGCTCATCCTTCCCGTATTTCTGAATTTGGAACCCTGGAGCAATCTCTTGGATTTCGTGTTGAAGATACCATTAATCTTAGCAGAAATCCGATGTTTAATCAAATGAAATCAAATAGCCAAGCTCTAGGTGCTGATATTCAATTTGGTGCTTTAAATAAGTCAATTGCAACATCGGATATAAACCTCTCTGCTGCTATTGCTGCATCTCAGGCACTGGTATTCCAAAAAGATTCGCAACCAACTCTGGCTTCGACATCTGCTGGTCGTGAGAACTGGGGAGAGACCAACATGGCTGATGCTAGCCCTAGGACTGATACTTCAACAGATGATACAGAAGACAAAAATCAAAGGCCTGAAAGGGATGAATCCAGTGGATCAAAAGATAAATCAGATCAAAAGACATTAAGACGGCTTGCTCAAAATCGTGAGGCTGCCAGGAAAAGCCGACTGAGGAAAAAGGCATATGTGCAACAATTAGAGAGCAGTAGGTTGAAACTGACCCAACTTGAGCAGGAGCTCCAGCGATCTCGCCAGCAGGGAATATTTATTTCAAGTACTGGAGATCAGGCACAGTCAATGAGTGGAAATGGCGCTATGGCATTTGATGTAGAGTACGCACGATGGTTAGAAGAGCATAATAGACAAACCAATGAGCTAAGGGCTGCAATAAATTCTCATGCTGGAGATATTGAACTTCGAACCATTGTTGACAATTTCATGACGCAGTTTGATGATATCTTCAGACTGAAAGGTATTGCAGCAAAAGCTGATGTTTTCCACATTCTGTCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTTCGGTCATCCGAACTCCTCAAGCTTCTTCTAAGTCAGTTGGAGCCTTTAGCCGAGCAACAATTGATGGGCATCTACAACTTGCAGCAATCATCCCAGCAGACTGAAGATGCTCTTTCCCAAGGGATGGATGCATTGCAGCAATCACTATCTGAGACATTGGCTAATGGTTCGCCCAGCTCATCAGGCTCCTCGGGAAATGTGGCAAATTACATGGGGCAAATGGCTATGGCCATGGGAAAGCTTGGTACACTTGAGGGGTTTCTTCACCAGGCTGACAATCTGCGGCAGCAGACATTACAACAAATGCTTCGAATATTAACGACCAGGCAATCGGCTCGTGCTCTTCTTGCCATCAGTGATTATTTCTCACGGCTGAGAGCGCTGAGTTCTTTGTGGCTTGCCAGGCCAAGGGAGTGA 1383 0.4519 MGSRSRTVNVNTKDTDKVLNGMPSYAPPLPSSSNSMAMEATNAHPSRISEFGTLEQSLGFRVEDTINLSRNPMFNQMKSNSQALGADIQFGALNKSIATSDINLSAAIAASQALVFQKDSQPTLASTSAGRENWGETNMADASPRTDTSTDDTEDKNQRPERDESSGSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRSRQQGIFISSTGDQAQSMSGNGAMAFDVEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFMTQFDDIFRLKGIAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLLSQLEPLAEQQLMGIYNLQQSSQQTEDALSQGMDALQQSLSETLANGSPSSSGSSGNVANYMGQMAMAMGKLGTLEGFLHQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01190 460 CDD bZIP_HBP1b-like 175 227 - -
Gma03g01190 460 MobiDBLite consensus disorder prediction 147 177 - -
Gma03g01190 460 PANTHER TGACG-SEQUENCE-SPECIFIC DNA-BINDING PROTEIN TGA-2.1 62 460 - -
Gma03g01190 460 MobiDBLite consensus disorder prediction 1 37 - -
Gma03g01190 460 SMART brlzneu 171 240 IPR004827 GO:0003700|GO:0006355
Gma03g01190 460 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Gma03g01190 460 Gene3D - 174 226 - -
Gma03g01190 460 Pfam Seed dormancy control 258 332 IPR025422 GO:0006351|GO:0043565
Gma03g01190 460 MobiDBLite consensus disorder prediction 1 18 - -
Gma03g01190 460 SUPERFAMILY Leucine zipper domain 175 218 IPR046347 GO:0003700|GO:0006355
Gma03g01190 460 Coils Coil 194 221 - -
Gma03g01190 460 Pfam bZIP transcription factor 175 215 IPR004827 GO:0003700|GO:0006355
Gma03g01190 460 MobiDBLite consensus disorder prediction 125 177 - -
Gma03g01190 460 ProSiteProfiles DOG1 domain profile. 240 457 IPR025422 GO:0006351|GO:0043565
Gma03g01190 460 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 217 IPR004827 GO:0003700|GO:0006355
Gma03g01190 460 MobiDBLite consensus disorder prediction 125 146 - -
Gma03g01190 460 PANTHER TRANSCRIPTION FACTOR TGA9 62 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01190 Gma-Chr3 37585331 37591689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01190 139 460 bZIP Transcription Factor Family AT3G12250 73.112 1.57e-168 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma03g01190 DOG1 1.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01190 K14431 - gmx:100780071 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01190 03 37585331 37591689 Gma03g01190 03 37585331 37591689 ECH
Gma19g01245 19 41364950 41371304 Gma03g01190 03 37585331 37591689 GST