Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01174 ATGGCGAAGCGTTTGATTCCACTGTTCAATCGGGTTTTGGTGGAGAAAATCGTGCCTCCATCAAAGACCAACGCTGGCATTTTGTTACCCGAGAAATCCTCCAAGCTAAATTCCGGAAAAGTTATTGCTGTTGGCCCTGGCTTTCACAGTAAGGATGGGAAGCTAATTCCTGTGGCTGTTAAGGAAGGTGATACTGTTCTTTTGCCTGAATATGGGGGAACTGAGGTGAAGCTTGATAACAAAGAGTATCATCTGTTTAGAGACGATGATATTCTGGGGACATTGCATGATTGA 294 0.4422 MAKRLIPLFNRVLVEKIVPPSKTNAGILLPEKSSKLNSGKVIAVGPGFHSKDGKLIPVAVKEGDTVLLPEYGGTEVKLDNKEYHLFRDDDILGTLHD 97
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01174 97 CDD cpn10 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g01174 97 SMART Cpn10_2 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g01174 97 Hamap Co-chaperonin GroES [groES]. 4 96 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g01174 97 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 97 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g01174 97 SUPERFAMILY GroES-like 3 96 IPR011032 -
Gma03g01174 97 PANTHER GROES-LIKE FAMILY PROTEIN 1 97 - -
Gma03g01174 97 Pfam Chaperonin 10 Kd subunit 5 94 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g01174 97 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g01174 97 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g01174 97 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g01174 97 PRINTS 10kDa chaperonin signature 82 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gma03g01174 97 Gene3D GroES chaperonin 1 97 IPR037124 GO:0006457
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma03g01174 Gma-Chr3 37341606 37343593 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01174 3 96 Calmodulin-binding Proteins AT5G20720 38.542 5.42e-12 57.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01174 K04078 - gmx:100306384 196.438
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01174 03 37341606 37343593 Gma03g01174 03 37341606 37343593 ECH