Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01169 ATGGCATCCAGTTCAATCTCAGCCTCTGGCTCATGGAGTGTTAAGGACAACAAGGCCTTTGAAAAGGCTTTAGCTGTTTATGACAAGGACACTCCTGACCGTTGGTACAATGTTGCTCATGCTGTTGGTGGCAAAACTCCAGAGGAAGTGAAAAGGCACTACGAACTCCTTGTTCAGGATGTTAAGCATATTGAGTCTGGACGTGTGCCATTCCCAAATTACAAGAAAACTACTTCAGGGTCAACTGATCAGGAGGAAAAAAGGCTGAGGAATTTGAATTTGAACCTCCAGTGA 294 0.4456 MASSSISASGSWSVKDNKAFEKALAVYDKDTPDRWYNVAHAVGGKTPEEVKRHYELLVQDVKHIESGRVPFPNYKKTTSGSTDQEEKRLRNLNLNLQ 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01169 97 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Gma03g01169 97 CDD SANT 18 58 IPR001005 -
Gma03g01169 97 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Gma03g01169 97 Coils Coil 82 97 - -
Gma03g01169 97 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Gma03g01169 97 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 94 IPR044636 GO:0003700
Gma03g01169 97 MobiDBLite consensus disorder prediction 69 97 - -
Gma03g01169 97 Gene3D - 2 71 - -
Gma03g01169 97 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Gma03g01169 97 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 94 - -
Gma03g01169 97 SMART sant 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01169 Gma-Chr3 37256754 37258016 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma03g01169 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01169 - - gmx:100818368 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01224 19 41084318 41084984 Gma03g01169 03 37256754 37258016 GST
Gma03g01169 03 37256754 37258016 Gma02g01435 02 17365123 17366086 PCT
Gma02g01435 02 17365123 17366086 Gma03g01169 03 37256754 37258016 PCT