Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01165 ATGAAGTCTTGGTCACTGGACGAGTGGAGGAACTACTTCGGGTCTGCGAATTCGGATATATTCGAGATAATTGAGCACGCCATAATTGTGGCGGCTTCGGATTGTCCTAAGGAGTTTAGAGTGAGGAGGGATTGGATTGCAGAGAGGTTGTTTTCTTGCAGGTTGACTCGGTGTGTGGGGTGTGACCGTGTTGAGTTGGCTGTGGGTGCAGATAGTAAAAAAGAGAAACATGATGGTGATGATGGTGATAATGATAAGAGTGGGTTTGAGAGAGATGGGGTTGAGTTTGAAGGTGCAGGGGCAAGCAAAGAGAGCAAGGTCAATGGGGATGCGAATCTTGGTGACAGCAATTATAGCTTTGGGGAGGCTGAAGCATTAAGTGATGAGATGGAAGAGGAGTCTCAGTATGTTGCGGAGATTTTGAGGATCAAGGATGTTCTGCTTAACCCTGAAGATGAGTCTGAGGCTGTGATATTTGAGTCATTGAGGAGGCTTCAGTTGATGGAACTCACCGTGGACTGTTTAAAGGCAACGGAGATTGGCAAGGCGGTCAATCCTCTCCGGAAACATGGATCGAAGGACATTCGTCAACTTGCCAGGACTCTCATCAATGGCTGGAAAGAAATGGTGGATGAGTGGGTTAAGGCCACTACTACCACAGCTATCACAGAAGAAGGTACACCAGATTCAGTGAATCCATCCGTTGTAGATGATGATGAAGAAGAAGGACTTCCATCACCTCCCTTGGATGAAGGGGCTTTCTTTGTCACTCAGGCTGGTTCAATGGAGCTGTCACAGTTCTTTGATGGCATGGACGACGATGGAAATCCTCGACCAACTGGACCATTCAGCAAGAACCATGAGAATGGCAGAAAGCCAGCTTTTGACAGCCATGTTTTAGAGATGAGGAAGTTGCAGCCTTCCCATGACACAGTCGTCATTAACAGAGATGTTAAGAGTCAGCAACAAGCAAAGGAAAACAAGGCTGCTGTCATGCCTGTGAGGCCAAATAAACCTGTAACAGCTGATTCCGGGCCTGGCAGACCCCCAAAATCAAATGTGCAGCGAAAAAGTAATATGGAGCCAAAGATGCAGCAAAAAATGGAGAACAATTCAATCACTAGGAGGCCTCCAACTGCTCAGTTAGATAAATCCAAGCGTTCAGATGACGATGCAGTCCAAGTAAAGCTAGAAGCCACCAAGAGAAAACTTCAGGAGAGCTATCAACAAGCTGAAAAAGCCAAGAGGCAGAGAACAATACAAGTTATGGAAATAAACGATCTTCCCAAGCAAGGTTTGCACCGAAATACACATTTCAAACCTGGATATCACAGTAGGCATTGGGCTAATGGTCGAAGATAA 1362 0.4611 MKSWSLDEWRNYFGSANSDIFEIIEHAIIVAASDCPKEFRVRRDWIAERLFSCRLTRCVGCDRVELAVGADSKKEKHDGDDGDNDKSGFERDGVEFEGAGASKESKVNGDANLGDSNYSFGEAEALSDEMEEESQYVAEILRIKDVLLNPEDESEAVIFESLRRLQLMELTVDCLKATEIGKAVNPLRKHGSKDIRQLARTLINGWKEMVDEWVKATTTTAITEEGTPDSVNPSVVDDDEEEGLPSPPLDEGAFFVTQAGSMELSQFFDGMDDDGNPRPTGPFSKNHENGRKPAFDSHVLEMRKLQPSHDTVVINRDVKSQQQAKENKAAVMPVRPNKPVTADSGPGRPPKSNVQRKSNMEPKMQQKMENNSITRRPPTAQLDKSKRSDDDAVQVKLEATKRKLQESYQQAEKAKRQRTIQVMEINDLPKQGLHRNTHFKPGYHSRHWANGRR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01165 453 MobiDBLite consensus disorder prediction 437 453 - -
Gma03g01165 453 MobiDBLite consensus disorder prediction 319 392 - -
Gma03g01165 453 ProSiteProfiles TFIIS N-terminal domain profile. 138 213 IPR017923 -
Gma03g01165 453 MobiDBLite consensus disorder prediction 266 292 - -
Gma03g01165 453 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 136 218 IPR035441 -
Gma03g01165 453 MobiDBLite consensus disorder prediction 219 248 - -
Gma03g01165 453 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 452 - -
Gma03g01165 453 MobiDBLite consensus disorder prediction 351 379 - -
Gma03g01165 453 MobiDBLite consensus disorder prediction 432 453 - -
Gma03g01165 453 Coils Coil 394 417 - -
Gma03g01165 453 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 452 IPR044805 -
Gma03g01165 453 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 128 222 IPR035441 -
Gma03g01165 453 CDD TFIIS_I 138 211 - -
Gma03g01165 453 Pfam TFIIS helical bundle-like domain 162 210 IPR017923 -
Gma03g01165 453 SMART TFS2_5 137 212 IPR003617 GO:0005634
Gma03g01165 453 MobiDBLite consensus disorder prediction 72 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01165 Gma-Chr3 37167838 37170785 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Gma03g01165 Med26 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01165 - - gmx:100817835 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01165 03 37167838 37170785 Gma03g01165 03 37167838 37170785 ECH
Gma19g01222 19 41026027 41032276 Gma03g01165 03 37167838 37170785 GST