Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01163 ATGACAAAGATAAGTCCTGAAGTTGAAATCAGGATGCCAATGGAGGCATTTCCGCCAGTTTCAGCTGATGTGAGCTTTATTTCTAATAGTTTTCCGAAGTACAAACTGGATGCTGATAATCAAGTTCTGGAAGAGCCAGTTGAGGATAACCAGGGTCCTTCTTTGAAGGACGTTATTGAACAAGAAGCTTCCAATTTGTCAGACCAACACAAGCGTATCTCAGTTCGTGACCTTGCCAGTAAATTTGACAAGAACCTGGCTGCAGCTGCTAAGTTGTCTAATGAGGCAAAGCTAAGAGACGTGGCATCTTTGGAGGGACATGTTCTTTTGAAAAAGCTAAGAGATGCCTTAGAATCTTTAAGAGGCCGTTTTGCAGGAAGAAACAAAGAGGATGTGGAGAAAGCTATCTCTATGGTGGAAGCTTTAGCAGTTAAGTTAACCCAAAATGAAGGAGAATTGATTCAAGAGAAGTTTGAAGTGAAGAAGCTTGTAAACTTTCTCAAACAGGCTTCTGAAGATGCTAAAAATTTGGTTAATCAAGAGAAGTCTTTTGCTTGTGCCGAAATTGAAAGTGCTAGAGCTGTGGTGCTGAGAATTGGGGAGGCTCTTGAAGAACAAGAAAAAGCTTCCCAAGCTTCTAAACCACAGGATGTGGATGGACTAGTCGAAGAGGTTCAAGAGTCTAGAAGAATCAAATTGTTGCATCACCCAAGCAAGGTGATGGCCATGGAATATGAACTACGTGCTCTTAGGGATCAAATTCGAGAGAAATCTATATTTTCAATTAAGCTTCAGAAAGAGCTAATCATGAGCAAGAGGAACGAGGAAAATAAATCTTGTTTATACATGTTAGATGGTTCTGAAGCTTTGGGTTCATATCTGCGAGTCCAGCCTTGCTCAGATGAAGTGCCACAGGTTTCGAAATGTTCATTTCAGTGGTACCGCTTGTCTTCTGAAGGCAGCTGGAGGGAAGTTATTTCAGGTGCCAACAAATCAATATATGCTCCTGACCCCTCTGATGTTGGGAGAATCTTACAAGTAGATATTGTCTCAAATGGGAAAAAGCTCACCCTAACAACTAATCCCATTCAAACTGTTTCAGGACTTGGAAGCCATGTGGAGACACTTCTACGAAAATCTAATACTGATTTTAATGTAGTTATTTCTCAAATGAATGGAAAAGATCACTCATCCCATTCTACTCATTCATTTAATGTGGGGAGAATGAGGATAAAGCTATGCAGAGGTTGGATTACAAAAGCTAGAGAGATTTACTCCCCATCAATGCAGCTATGTGGCGTTAGAAGTGATGTCGCGAATGCAGCGAAGGTGTTGTTTTGGCAAGCAAGAAAGGGCCTCTCATTTGTATTAACCTTTGAATCAGAGAGAGACCGAAATTCAGCCATTATGGTTGCCAGGAAATATGCTCTTGATTGCAATGTCGTGCTTGCCGGGCCAGATGATCTAGTAAGACCAAAGAAGAATTTCGCAAATGGCATCAAGACCCACGGTTCAACAACAAGCCAGAGGAGTTTTGGTGCCAAACTACTTGCCACTGTGCAAGCACCAGCAGCTGCTGAAAACAACATGAAACAAGCATGTGCTAATGTGGCTGGAGCTCCTCCTGTTGCTAAAGGAGTTGCGCTGGCCAAAAGAGCGGTGGCCCCCAAACCGGGTCAGAAGAAAGTGACTGTAAAACCTAAGTCTGAGGAAAAAAAGGAAAAGAAATCATGCAGTCTTACTTCAGTATTCACAGCTCGAAGCAAGCCGAAGGATCAGATTCTTGACATCGATGCTTCTGATGTTGACAATGAACTTGCTGCTGTGGAGTATATTGATGACATTTACAAGTTCTATAAGCTTGTTGAGAACGAGAGCCACCCCCGTGACAACATAGACTCACAACCTGAGATAACTGAGAGGATGAGAGCTATACTAGTTGATTGGCTGATACAAGTCCAAACCAAGTTTGAACTTTCACTTGAGACCCTTTACTTGACAATCAATATAGTTGATTGGTTCCTGGCGGTTAAGAATGTTCCAAAGAGGGAACTGCAATTGGTTGGCATCAGTGCTGTGCAGATGGCAACCAAGTATGAAGAAATCTATCCCCCTCAGGTTCATAACTTTGTCTTCCTCTCAGGTAGGGCTTACACTCATGAACAGATACTGATTATGGAGAAAATCATACTGGCCAAGCTGGACTGGACTTTGACTGTGCCAATACCTTTGGTTTTCCTACTTCGTTTTATCAAGGCATCAGTCCCAGATCAGGAGTTGGAAAACATGGCTCATTTTCTGTCTGAGTTGGGATTGATGAATTATGCGACTGAAATGTATTGGCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGATGCACTCTGAATAAGGCTCCCCTTTGGAATGAGACACTTAAGCTGCAGACAGGTTACTCACAAGAACAACTTATGTAT 2460 0.424 MTKISPEVEIRMPMEAFPPVSADVSFISNSFPKYKLDADNQVLEEPVEDNQGPSLKDVIEQEASNLSDQHKRISVRDLASKFDKNLAAAAKLSNEAKLRDVASLEGHVLLKKLRDALESLRGRFAGRNKEDVEKAISMVEALAVKLTQNEGELIQEKFEVKKLVNFLKQASEDAKNLVNQEKSFACAEIESARAVVLRIGEALEEQEKASQASKPQDVDGLVEEVQESRRIKLLHHPSKVMAMEYELRALRDQIREKSIFSIKLQKELIMSKRNEENKSCLYMLDGSEALGSYLRVQPCSDEVPQVSKCSFQWYRLSSEGSWREVISGANKSIYAPDPSDVGRILQVDIVSNGKKLTLTTNPIQTVSGLGSHVETLLRKSNTDFNVVISQMNGKDHSSHSTHSFNVGRMRIKLCRGWITKAREIYSPSMQLCGVRSDVANAAKVLFWQARKGLSFVLTFESERDRNSAIMVARKYALDCNVVLAGPDDLVRPKKNFANGIKTHGSTTSQRSFGAKLLATVQAPAAAENNMKQACANVAGAPPVAKGVALAKRAVAPKPGQKKVTVKPKSEEKKEKKSCSLTSVFTARSKPKDQILDIDASDVDNELAAVEYIDDIYKFYKLVENESHPRDNIDSQPEITERMRAILVDWLIQVQTKFELSLETLYLTINIVDWFLAVKNVPKRELQLVGISAVQMATKYEEIYPPQVHNFVFLSGRAYTHEQILIMEKIILAKLDWTLTVPIPLVFLLRFIKASVPDQELENMAHFLSELGLMNYATEMYWPSMVAASAVFAARCTLNKAPLWNETLKLQTGYSQEQLMY 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01163 820 Pfam Cyclin, N-terminal domain 614 738 IPR006671 -
Gma03g01163 820 CDD CYCLIN 642 731 IPR013763 -
Gma03g01163 820 Pfam Ig domain of plant-specific actin-binding protein 282 378 - -
Gma03g01163 820 SMART cyclin_7 648 732 IPR013763 -
Gma03g01163 820 SMART cyclin_7 745 820 IPR013763 -
Gma03g01163 820 Pfam Cyclin, C-terminal domain 741 819 IPR004367 -
Gma03g01163 820 Gene3D - 269 365 - -
Gma03g01163 820 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 3 1 488 - -
Gma03g01163 820 CDD CYCLIN 739 817 IPR013763 -
Gma03g01163 820 Pfam PH domain of plant-specific actin-binding protein 381 488 IPR041144 -
Gma03g01163 820 Pfam Coiled-coil regions of plant-specific actin-binding protein 101 268 IPR032009 -
Gma03g01163 820 Gene3D - 366 495 - -
Gma03g01163 820 Gene3D - 628 739 - -
Gma03g01163 820 Gene3D - 614 818 - -
Gma03g01163 820 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 1 1 488 IPR039640 GO:0003779|GO:0007015|GO:0010119
Gma03g01163 820 SUPERFAMILY Cyclin-like 740 819 IPR036915 -
Gma03g01163 820 Gene3D - 101 152 - -
Gma03g01163 820 Pfam Actin-binding domain of plant-specific actin-binding protein 55 97 IPR032012 GO:0003779
Gma03g01163 820 SUPERFAMILY Cyclin-like 603 738 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01163 Gma-Chr3 37096770 37107422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01163 510 819 Core Cell Cycle Gene Families AT3G11520 51.582 1.31e-103 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01163 - - gmx:100816432 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g01163 03 37096770 37107422 Gma03g01163 03 37096770 37107422 ECH