Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g01162 ATGGCATCAAGAGTCAACCGCCCCATCACAAGGAGTTTTTCTGCTCAAATTCTTGCCAAAGTACAAGCAGCAGCCAAGAATAACAAGAAACAGGCTTCTGTCAAGGTAAAACCAAAGGCTGAGGAAGTGATTGACATTGAAGCTGGTCCAGACAAGGAGGTCCAGAAAAACAAGAACAAGGAATCACGCGCTTCTACTTCAGTTCTCACAGCTCGAAGCAACGCAGCATGTGACATAACAAACAAACCAAGGGAGCAGATTATTGACATTGACGCTTCTGATTCTGACAATGAGCTTGCTGCTGTGGAGTATATTGATGACATTTGCAAGTTCTATAAGCTAGTTGAGAACGAGAACCACCCTCATGACTACATAGACTCACAACCTGAGATAGATCAGAGGTCGAGAGCTATTCTAGTTAATTGGCTGATAGATGTCCACACCAACCTTGACCTTTCACTTGAGACCATTTACCTGACCATCAACATAATTGATCGGTTCCTAGCTGTTAAGACAGTTCCAAGGTTGGAAATGCAATTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAATATGAAGAAATTTGGACTCTTGAGGTTGATGAATTAGTCCGCCTCACAGATTATACTCATGAACAGGTTCTGGTCATGGAGAAAACCATATTGAATAAGCTGGAATGGAATTTGACTGTGCCAACAACTTTTGTTTTCCTGGTTCGTTTCATCAAGGCATCAGTCCCAGATCAGGAGTTAGAAAACATGGCACATTTTCTGTCTGAGTTGGGAATGATGCACTATGCCACCTTAAAGTACTTCCCATCAATGGTTGCTGCCTCAGCAGTGTTTGCAGCTAGATGCACTCTGAATAAGGCTCCCCTTTGGACTGAGACACTTAAGCTGCACACTGGTTATTCACAAGGACAACTTATGGATTGTGCTAGATTATTGGTGAGCTTCCACTCCATGGCTGGGAATGGAGAGGAGAAGGTTGTGTACATAAAGTATTCTGATCCTGAGAAAGGAGCTGTTGCTATGCTTCCACCAGCTAAAAATCTTATGCCTGAAGGTTCTGACTCTCAGTAG 1083 0.4349 MASRVNRPITRSFSAQILAKVQAAAKNNKKQASVKVKPKAEEVIDIEAGPDKEVQKNKNKESRASTSVLTARSNAACDITNKPREQIIDIDASDSDNELAAVEYIDDICKFYKLVENENHPHDYIDSQPEIDQRSRAILVNWLIDVHTNLDLSLETIYLTINIIDRFLAVKTVPRLEMQLVGISAMLMASKYEEIWTLEVDELVRLTDYTHEQVLVMEKTILNKLEWNLTVPTTFVFLVRFIKASVPDQELENMAHFLSELGMMHYATLKYFPSMVAASAVFAARCTLNKAPLWTETLKLHTGYSQGQLMDCARLLVSFHSMAGNGEEKVVYIKYSDPEKGAVAMLPPAKNLMPEGSDSQ 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g01162 360 Gene3D - 107 344 - -
Gma03g01162 360 Pfam Cyclin, C-terminal domain 232 348 IPR004367 -
Gma03g01162 360 Gene3D - 121 230 - -
Gma03g01162 360 MobiDBLite consensus disorder prediction 47 67 - -
Gma03g01162 360 PIRSF Cyclin_A_B_D_E 19 360 IPR039361 -
Gma03g01162 360 PIRSF Cyclin_A_B_D_E 1 53 IPR039361 -
Gma03g01162 360 SUPERFAMILY Cyclin-like 96 235 IPR036915 -
Gma03g01162 360 PANTHER CYCLINS 12 354 IPR039361 -
Gma03g01162 360 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 12 354 - -
Gma03g01162 360 SMART cyclin_7 141 223 IPR013763 -
Gma03g01162 360 SMART cyclin_7 236 318 IPR013763 -
Gma03g01162 360 CDD CYCLIN 230 317 IPR013763 -
Gma03g01162 360 Pfam Cyclin, N-terminal domain 107 230 IPR006671 -
Gma03g01162 360 SMART Cyclin_C_2 232 349 IPR004367 -
Gma03g01162 360 SUPERFAMILY Cyclin-like 231 350 IPR036915 -
Gma03g01162 360 ProSitePatterns Cyclins signature. 136 167 IPR006671 -
Gma03g01162 360 CDD CYCLIN 135 222 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g01162 Gma-Chr3 37071257 37074388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g01162 6 359 Core Cell Cycle Gene Families AT4G37490 51.604 1.46e-123 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g01162 K21777 - gmx:100789141 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01220 19 40956276 40968170 Gma03g01162 03 37071257 37074388 GST